Changeset f66195 for src/parser.hpp
- Timestamp:
- Oct 9, 2009, 10:54:52 AM (16 years ago)
- Branches:
- Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
- Children:
- 49f802c
- Parents:
- e41951
- File:
-
- 1 edited
Legend:
- Unmodified
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src/parser.hpp
re41951 rf66195 1 /** \file pars ing.hpp1 /** \file parser.hpp 2 2 * 3 3 * Definitions of various class functions for the parsing of value files. … … 6 6 7 7 8 #ifndef PARS ING_HPP_9 #define PARS ING_HPP_8 #ifndef PARSER_HPP_ 9 #define PARSER_HPP_ 10 10 11 11 using namespace std; 12 13 /*********************************************** includes ***********************************/ 12 14 13 15 // include config.h … … 16 18 #endif 17 19 18 // ======================================= DEFINES ========================================== 20 /****************************************** forward declarations *****************************/ 21 22 class EnergyMatrix; 23 class ForceMatrix; 24 class HessianMatrix; 25 class KeySetsContainer; 26 class MatrixContainer; 27 28 /********************************************** definitions *********************************/ 19 29 20 30 #define EnergySuffix ".energy.all" … … 42 52 bool TestParams(int argc, char **argv); 43 53 54 // ======================================= CLASS KeySetsContainer ============================= 55 56 class KeySetsContainer { 57 public: 58 int **KeySets; 59 int *AtomCounter; 60 int FragmentCounter; 61 int Order; 62 int *FragmentsPerOrder; 63 int **OrderSet; 64 65 KeySetsContainer(); 66 ~KeySetsContainer(); 67 68 bool ParseKeySets(const char *name, const int *ACounter, const int FCounter); 69 bool ParseManyBodyTerms(); 70 bool Contains(const int GreaterSet, const int SmallerSet); 71 }; 44 72 45 73 // ======================================= CLASS MatrixContainer ============================= … … 68 96 //bool ParseIndices(); 69 97 //bool SumSubValues(); 70 bool SumSubManyBodyTerms(class MatrixContainer &Matrix, class KeySetsContainer &KeySet , int Order);98 bool SumSubManyBodyTerms(class MatrixContainer &Matrix, class KeySetsContainer &KeySets, int Order); 71 99 bool WriteTotalFragments(const char *name, const char *prefix); 72 100 bool WriteLastMatrix(const char *name, const char *prefix, const char *suffix); … … 78 106 public: 79 107 bool ParseIndices(); 80 bool SumSubEnergy(class EnergyMatrix &Fragments, class EnergyMatrix *CorrectionFragments, class KeySetsContainer &KeySet , int Order, double sign);108 bool SumSubEnergy(class EnergyMatrix &Fragments, class EnergyMatrix *CorrectionFragments, class KeySetsContainer &KeySets, int Order, double sign); 81 109 bool ParseFragmentMatrix(const char *name, const char *prefix, string suffix, int skiplines, int skipcolumns); 82 110 }; … … 87 115 public: 88 116 bool ParseIndices(const char *name); 89 bool SumSubForces(class ForceMatrix &Fragments, class KeySetsContainer &KeySet , int Order, double sign);117 bool SumSubForces(class ForceMatrix &Fragments, class KeySetsContainer &KeySets, int Order, double sign); 90 118 bool ParseFragmentMatrix(const char *name, const char *prefix, string suffix, int skiplines, int skipcolumns); 91 119 }; … … 98 126 //~HessianMatrix(); 99 127 bool ParseIndices(char *name); 100 bool SumSubManyBodyTerms(class MatrixContainer &MatrixValues, class KeySetsContainer &KeySet , int Order);101 bool SumSubHessians(class HessianMatrix &Fragments, class KeySetsContainer &KeySet , int Order, double sign);128 bool SumSubManyBodyTerms(class MatrixContainer &MatrixValues, class KeySetsContainer &KeySets, int Order); 129 bool SumSubHessians(class HessianMatrix &Fragments, class KeySetsContainer &KeySets, int Order, double sign); 102 130 bool ParseFragmentMatrix(const char *name, const char *prefix, string suffix, int skiplines, int skipcolumns); 103 131 private: … … 105 133 }; 106 134 107 // ======================================= CLASS KeySetsContainer =============================108 109 class KeySetsContainer {110 public:111 int **KeySets;112 int *AtomCounter;113 int FragmentCounter;114 int Order;115 int *FragmentsPerOrder;116 int **OrderSet;117 118 KeySetsContainer();119 ~KeySetsContainer();120 121 bool ParseKeySets(const char *name, const int *ACounter, const int FCounter);122 bool ParseManyBodyTerms();123 bool Contains(const int GreaterSet, const int SmallerSet);124 };125 135 126 136 // ======================================= END ============================================= 127 137 128 #endif /*PARS ING_HPP_*/138 #endif /*PARSER_HPP_*/
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