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(edit)
@3e334e
7 years
frederik.heber
Merge branch 'AutomationFragmentation_failures' into Candidate_v1.6.1
Candidate_v1.6.1
ChemicalSpaceEvaluator
(edit)
@2ee2cc
7 years
frederik.heber
TESTS: Reactivated again all tests related to bond graph optimization.
Candidate_v1.6.1
ChemicalSpaceEvaluator
Exclude_Hydrogens_annealWithBondGraph
(edit)
@3183f5
7 years
frederik.heber
DOCU: Added explanation of bond graph optimization to userguide.
Candidate_v1.6.1
ChemicalSpaceEvaluator
Exclude_Hydrogens_annealWithBondGraph
(edit)
@0682c2
7 years
frederik.heber
Excluded hydrogens due to their small mass from spreading updates. - …
Candidate_v1.6.1
ChemicalSpaceEvaluator
Exclude_Hydrogens_annealWithBondGraph
(edit)
@bd19c1
7 years
frederik.heber
Capping BB update step at 0.2 and general BB stepwidth at maximum of …
Candidate_v1.6.1
ChemicalSpaceEvaluator
Exclude_Hydrogens_annealWithBondGraph
ForceAnnealing_with_BondGraph_contraction-expansion
(edit)
@06536b
7 years
frederik.heber
annealWithBondGraph_BarzilaiBorwein() is using getBBStepWidth(), too.
Candidate_v1.6.1
ChemicalSpaceEvaluator
Exclude_Hydrogens_annealWithBondGraph
ForceAnnealing_with_BondGraph_contraction-expansion
(edit)
@8c0ac9
7 years
frederik.heber
TESTFIX: Made integration tests for structure optimization of water …
Candidate_v1.6.1
ChemicalSpaceEvaluator
Exclude_Hydrogens_annealWithBondGraph
ForceAnnealing_with_BondGraph_contraction-expansion
(edit)
@e72d94
7 years
frederik.heber
TESTFIX: threshold check in integration tests on structure …
Candidate_v1.6.1
ChemicalSpaceEvaluator
Exclude_Hydrogens_annealWithBondGraph
ForceAnnealing_with_BondGraph_contraction-expansion
(edit)
@31baf0
7 years
frederik.heber
TESTFIX: Readded missing Structure Optimization integration tests. - …
Candidate_v1.6.1
ChemicalSpaceEvaluator
Exclude_Hydrogens_annealWithBondGraph
ForceAnnealing_with_BondGraph_contraction-expansion
(edit)
@b3aaf4
7 years
frederik.heber
Preventing cancelling updates for optimization with bond graph. - we …
Candidate_v1.6.1
ChemicalSpaceEvaluator
Exclude_Hydrogens_annealWithBondGraph
ForceAnnealing_with_BondGraph_contraction-expansion
(edit)
@883d98
7 years
frederik.heber
FIX: Removed deltat reduction from anneal_BarzilaiBorwein() as it …
Candidate_v1.6.1
ChemicalSpaceEvaluator
Exclude_Hydrogens_annealWithBondGraph
ForceAnnealing_with_BondGraph_contraction-expansion
(edit)
@a6c11a
7 years
frederik.heber
All failures in
FragmentationAutomation
are explained by log statements.
AutomationFragmentation_failures
Candidate_v1.6.1
ChemicalSpaceEvaluator
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