Changes in / [68f03d:6d789df]
- Location:
- tests/Tesselations
- Files:
-
- 105 added
- 26 deleted
- 17 edited
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1_2-dimethoxyethane.test (modified) (1 diff)
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1_2-dimethoxyethane/1.5/NonConvexEnvelope-1_2-dimethoxyethane.dat (added)
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1_2-dimethoxyethane/2.5/NonConvexEnvelope-1_2-dimethoxyethane.dat (added)
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1_2-dimethoxyethane/2/NonConvexEnvelope-1_2-dimethoxyethane.dat (added)
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1_2-dimethoxyethane/25/NonConvexEnvelope-1_2-dimethoxyethane.dat (added)
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1_2-dimethoxyethane/3.5/NonConvexEnvelope-1_2-dimethoxyethane.dat (added)
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1_2-dimethoxyethane/3/NonConvexEnvelope-1_2-dimethoxyethane.dat (added)
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1_2-dimethoxyethane/4/NonConvexEnvelope-1_2-dimethoxyethane.dat (added)
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1_2-dimethoxyethane/NonConvexEnvelope-1_2-dimethoxyethane.dat (deleted)
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1_2-dimethylbenzene.test (modified) (1 diff)
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1_2-dimethylbenzene/1.5/NonConvexEnvelope-1_2-dimethylbenzene.dat (added)
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1_2-dimethylbenzene/2.5/NonConvexEnvelope-1_2-dimethylbenzene.dat (added)
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1_2-dimethylbenzene/2/NonConvexEnvelope-1_2-dimethylbenzene.dat (added)
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1_2-dimethylbenzene/25/NonConvexEnvelope-1_2-dimethylbenzene.dat (added)
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1_2-dimethylbenzene/3.5/NonConvexEnvelope-1_2-dimethylbenzene.dat (added)
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1_2-dimethylbenzene/3/NonConvexEnvelope-1_2-dimethylbenzene.dat (added)
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1_2-dimethylbenzene/4/NonConvexEnvelope-1_2-dimethylbenzene.dat (added)
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1_2-dimethylbenzene/NonConvexEnvelope-1_2-dimethylbenzene.dat (deleted)
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2-methylcyclohexanone.test (modified) (1 diff)
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2-methylcyclohexanone/1.5/NonConvexEnvelope-2-methylcyclohexanone.dat (added)
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2-methylcyclohexanone/2.5/NonConvexEnvelope-2-methylcyclohexanone.dat (added)
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2-methylcyclohexanone/2/NonConvexEnvelope-2-methylcyclohexanone.dat (added)
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2-methylcyclohexanone/25/NonConvexEnvelope-2-methylcyclohexanone.dat (added)
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2-methylcyclohexanone/3.5/NonConvexEnvelope-2-methylcyclohexanone.dat (added)
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2-methylcyclohexanone/3/NonConvexEnvelope-2-methylcyclohexanone.dat (added)
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2-methylcyclohexanone/4/NonConvexEnvelope-2-methylcyclohexanone.dat (added)
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2-methylcyclohexanone/NonConvexEnvelope-2-methylcyclohexanone.dat (deleted)
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C16_0-Torus.test (deleted)
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C16_0-Torus/C16_0-Torus.xyz (deleted)
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C16_0-Torus/NonConvexEnvelope-C16_0-Torus.dat (deleted)
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Makefile.am (modified) (2 diffs)
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N_N-dimethylacetamide.test (modified) (1 diff)
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N_N-dimethylacetamide/1.5/NonConvexEnvelope-N_N-dimethylacetamide.dat (added)
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N_N-dimethylacetamide/2.5/NonConvexEnvelope-N_N-dimethylacetamide.dat (added)
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N_N-dimethylacetamide/2/NonConvexEnvelope-N_N-dimethylacetamide.dat (added)
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N_N-dimethylacetamide/25/NonConvexEnvelope-N_N-dimethylacetamide.dat (added)
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N_N-dimethylacetamide/3.5/NonConvexEnvelope-N_N-dimethylacetamide.dat (added)
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N_N-dimethylacetamide/3/NonConvexEnvelope-N_N-dimethylacetamide.dat (added)
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N_N-dimethylacetamide/4/NonConvexEnvelope-N_N-dimethylacetamide.dat (added)
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N_N-dimethylacetamide/NonConvexEnvelope-N_N-dimethylacetamide.dat (deleted)
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benzene.test (modified) (1 diff)
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benzene/1.5/NonConvexEnvelope-benzene.dat (added)
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benzene/2.5/NonConvexEnvelope-benzene.dat (added)
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benzene/2/NonConvexEnvelope-benzene.dat (added)
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benzene/25/NonConvexEnvelope-benzene.dat (added)
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benzene/3.5/NonConvexEnvelope-benzene.dat (added)
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benzene/3/NonConvexEnvelope-benzene.dat (added)
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benzene/4/NonConvexEnvelope-benzene.dat (added)
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benzene/NonConvexEnvelope-benzene.dat (deleted)
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cholesterol.test (modified) (1 diff)
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cholesterol/1.5/NonConvexEnvelope-cholesterol.dat (added)
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cholesterol/2.5/NonConvexEnvelope-cholesterol.dat (added)
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cholesterol/2/NonConvexEnvelope-cholesterol.dat (added)
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cholesterol/25/NonConvexEnvelope-cholesterol.dat (added)
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cholesterol/3.5/NonConvexEnvelope-cholesterol.dat (added)
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cholesterol/3/NonConvexEnvelope-cholesterol.dat (added)
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cholesterol/4/NonConvexEnvelope-cholesterol.dat (added)
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cholesterol/NonConvexEnvelope-cholesterol.dat (deleted)
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cluster.test (deleted)
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cluster/NonConvexEnvelope-cluster.dat (deleted)
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cluster/cluster.dbond (deleted)
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cluster/cluster.xyz (deleted)
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cycloheptane.test (modified) (1 diff)
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cycloheptane/1.5/NonConvexEnvelope-cycloheptane.dat (added)
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cycloheptane/2.5/NonConvexEnvelope-cycloheptane.dat (added)
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cycloheptane/2/NonConvexEnvelope-cycloheptane.dat (added)
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cycloheptane/25/NonConvexEnvelope-cycloheptane.dat (added)
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cycloheptane/3.5/NonConvexEnvelope-cycloheptane.dat (added)
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cycloheptane/3/NonConvexEnvelope-cycloheptane.dat (added)
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cycloheptane/4/NonConvexEnvelope-cycloheptane.dat (added)
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cycloheptane/NonConvexEnvelope-cycloheptane.dat (deleted)
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defs.in (modified) (2 diffs)
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dimethyl_bromomalonate.test (modified) (1 diff)
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dimethyl_bromomalonate/1.5/NonConvexEnvelope-dimethyl_bromomalonate.dat (added)
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dimethyl_bromomalonate/2.5/NonConvexEnvelope-dimethyl_bromomalonate.dat (added)
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dimethyl_bromomalonate/2/NonConvexEnvelope-dimethyl_bromomalonate.dat (added)
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dimethyl_bromomalonate/25/NonConvexEnvelope-dimethyl_bromomalonate.dat (added)
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dimethyl_bromomalonate/3.5/NonConvexEnvelope-dimethyl_bromomalonate.dat (added)
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dimethyl_bromomalonate/3/NonConvexEnvelope-dimethyl_bromomalonate.dat (added)
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dimethyl_bromomalonate/4/NonConvexEnvelope-dimethyl_bromomalonate.dat (added)
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dimethyl_bromomalonate/NonConvexEnvelope-dimethyl_bromomalonate.dat (deleted)
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glucose.test (modified) (1 diff)
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glucose/1.5/NonConvexEnvelope-glucose.dat (added)
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glucose/2.5/NonConvexEnvelope-glucose.dat (added)
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glucose/2/NonConvexEnvelope-glucose.dat (added)
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glucose/25/NonConvexEnvelope-glucose.dat (added)
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glucose/3.5/NonConvexEnvelope-glucose.dat (added)
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glucose/3/NonConvexEnvelope-glucose.dat (added)
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glucose/4/NonConvexEnvelope-glucose.dat (added)
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glucose/NonConvexEnvelope-glucose.dat (deleted)
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heptan.test (modified) (1 diff)
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heptan/1.5/NonConvexEnvelope-heptan.dat (added)
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heptan/2.5/NonConvexEnvelope-heptan.dat (added)
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heptan/2/NonConvexEnvelope-heptan.dat (added)
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heptan/25/NonConvexEnvelope-heptan.dat (added)
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heptan/3.5/NonConvexEnvelope-heptan.dat (added)
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heptan/3/NonConvexEnvelope-heptan.dat (added)
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heptan/4/NonConvexEnvelope-heptan.dat (added)
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heptan/NonConvexEnvelope-heptan.dat (deleted)
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isoleucine.test (modified) (1 diff)
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isoleucine/1.5/NonConvexEnvelope-isoleucine.dat (added)
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isoleucine/2.5/NonConvexEnvelope-isoleucine.dat (added)
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isoleucine/2/NonConvexEnvelope-isoleucine.dat (added)
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isoleucine/25/NonConvexEnvelope-isoleucine.dat (added)
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isoleucine/3.5/NonConvexEnvelope-isoleucine.dat (added)
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isoleucine/3/NonConvexEnvelope-isoleucine.dat (added)
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isoleucine/4/NonConvexEnvelope-isoleucine.dat (added)
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isoleucine/NonConvexEnvelope-isoleucine.dat (deleted)
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neohexane.test (modified) (1 diff)
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neohexane/1.5/NonConvexEnvelope-neohexane.dat (added)
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neohexane/2.5/NonConvexEnvelope-neohexane.dat (added)
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neohexane/2/NonConvexEnvelope-neohexane.dat (added)
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neohexane/25/NonConvexEnvelope-neohexane.dat (added)
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neohexane/3.5/NonConvexEnvelope-neohexane.dat (added)
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neohexane/3/NonConvexEnvelope-neohexane.dat (added)
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neohexane/4/NonConvexEnvelope-neohexane.dat (added)
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neohexane/NonConvexEnvelope-neohexane.dat (deleted)
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proline.test (modified) (1 diff)
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proline/1.5/NonConvexEnvelope-proline.dat (added)
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proline/2.5/NonConvexEnvelope-proline.dat (added)
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proline/2/NonConvexEnvelope-proline.dat (added)
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proline/25/NonConvexEnvelope-proline.dat (added)
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proline/3.5/NonConvexEnvelope-proline.dat (added)
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proline/3/NonConvexEnvelope-proline.dat (added)
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proline/4/NonConvexEnvelope-proline.dat (added)
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proline/NonConvexEnvelope-proline.dat (deleted)
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putrescine.test (modified) (1 diff)
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putrescine/1.5/NonConvexEnvelope-putrescine.dat (added)
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putrescine/2.5/NonConvexEnvelope-putrescine.dat (added)
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putrescine/2/NonConvexEnvelope-putrescine.dat (added)
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putrescine/25/NonConvexEnvelope-putrescine.dat (added)
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putrescine/3.5/NonConvexEnvelope-putrescine.dat (added)
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putrescine/3/NonConvexEnvelope-putrescine.dat (added)
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putrescine/4/NonConvexEnvelope-putrescine.dat (added)
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putrescine/NonConvexEnvelope-putrescine.dat (deleted)
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round_cluster.test (deleted)
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round_cluster/NonConvexEnvelope-round_cluster.dat (deleted)
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round_cluster/round_cluster.dbond (deleted)
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round_cluster/round_cluster.xyz (deleted)
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tartaric_acid.test (modified) (1 diff)
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tartaric_acid/1.5/NonConvexEnvelope-tartaric_acid.dat (added)
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tartaric_acid/2.5/NonConvexEnvelope-tartaric_acid.dat (added)
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tartaric_acid/2/NonConvexEnvelope-tartaric_acid.dat (added)
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tartaric_acid/25/NonConvexEnvelope-tartaric_acid.dat (added)
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tartaric_acid/3.5/NonConvexEnvelope-tartaric_acid.dat (added)
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tartaric_acid/3/NonConvexEnvelope-tartaric_acid.dat (added)
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tartaric_acid/4/NonConvexEnvelope-tartaric_acid.dat (added)
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tartaric_acid/NonConvexEnvelope-tartaric_acid.dat (deleted)
Legend:
- Unmodified
- Added
- Removed
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tests/Tesselations/1_2-dimethoxyethane.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/1_2-dimethylbenzene.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/2-methylcyclohexanone.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/Makefile.am
r68f03d r6d789df 4 4 benzene.test \ 5 5 cholesterol.test \ 6 cluster.test \7 6 cycloheptane.test \ 8 7 dimethyl_bromomalonate.test \ … … 14 13 proline.test \ 15 14 putrescine.test \ 16 round_cluster.test \17 15 tartaric_acid.test 18 #NTorus16_8.test19 #C16_0-Torus.test -
tests/Tesselations/N_N-dimethylacetamide.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/benzene.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/cholesterol.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/cycloheptane.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/defs.in
r68f03d r6d789df 24 24 if $need_testdir 25 25 then 26 if $testdir_exists; then :; else 27 mkdir $testdir 28 CLEANUP="$CLEANUP; rmdir $testdir" 26 if $testdir_exists; then 27 rm -rf $testdir 29 28 fi 30 cp @srcdir@/$testdir/* $testdir/ 29 mkdir $testdir 30 CLEANUP="$CLEANUP; rm -rf $testdir" 31 cp -r @srcdir@/$testdir/* $testdir/ 31 32 cd $testdir 32 33 CLEANUP="rm -f stderr stdout diffstderr diffstdout; cd ..; $CLEANUP" … … 51 52 FILENAME="NonConvexEnvelope" 52 53 exitcode=0 53 #echo "Current dir is `pwd`, calling $MOLECUILDER $mol.conf -e $exec_prefix -p $mol.xyz -c 5. 5. 5. -N $RADIUS $FILENAME." 54 cd $RADIUS 55 #echo "Current dir is `pwd`, calling $MOLECUILDER $mol.conf -e $exec_prefix -p ../$mol.xyz -N $RADIUS $FILENAME." 54 56 if [ -e $mol.dbond ]; then 55 $MOLECUILDER $mol.conf -e $exec_prefix -p $mol.xyz -c 5. 5. 5.-A $mol.dbond -N $RADIUS $FILENAME 2>stderr >stdout || exitcode=$?57 $MOLECUILDER $mol.conf -e $exec_prefix -p ../$mol.xyz -A $mol.dbond -N $RADIUS $FILENAME 2>stderr >stdout || exitcode=$? 56 58 else 57 $MOLECUILDER $mol.conf -e $exec_prefix -p $mol.xyz -c 5. 5. 5.-N $RADIUS $FILENAME 2>stderr >stdout || exitcode=$?59 $MOLECUILDER $mol.conf -e $exec_prefix -p ../$mol.xyz -N $RADIUS $FILENAME 2>stderr >stdout || exitcode=$? 58 60 fi 61 #echo "Molecuilder done with exitcode $exitcode." 59 62 #cat stderr 60 63 #cat stdout 61 #diff ${FILENAME}.dat @srcdir@/$mol/${FILENAME}-$mol.dat 2>diffstderr >diffstdout || exitcode=$? 64 diff ${FILENAME}.dat ../@srcdir@/$mol/$2/${FILENAME}-$mol.dat 2>diffstderr >diffstdout || exitcode=$? 65 #echo "Diff done with exitcode $exitcode." 66 #cat diffstderr 67 #cat diffstdout 68 cd .. 62 69 test $exitcode = $expected_exitcode || exit 1 63 70 } -
tests/Tesselations/dimethyl_bromomalonate.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/glucose.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/heptan.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/isoleucine.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/neohexane.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/proline.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/putrescine.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done -
tests/Tesselations/tartaric_acid.test
r68f03d r6d789df 6 6 set -e 7 7 8 Tesselation_run 0 4. 8 for radius in 1.5 2 2.5 3 3.5 4 25; do 9 Tesselation_run 0 $radius 10 done 11
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