| [075357] | 1 | # | 
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|  | 2 | #    MoleCuilder - creates and alters molecular systems | 
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|  | 3 | #    Copyright (C) 2017 Frederik Heber | 
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|  | 4 | # | 
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|  | 5 | #    This program is free software: you can redistribute it and/or modify | 
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|  | 6 | #    it under the terms of the GNU General Public License as published by | 
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|  | 7 | #    the Free Software Foundation, either version 3 of the License, or | 
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|  | 8 | #    (at your option) any later version. | 
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|  | 9 | # | 
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|  | 10 | #    This program is distributed in the hope that it will be useful, | 
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|  | 11 | #    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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|  | 12 | #    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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|  | 13 | #    GNU General Public License for more details. | 
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|  | 14 | # | 
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|  | 15 | #    You should have received a copy of the GNU General Public License | 
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|  | 16 | #    along with this program.  If not, see <http://www.gnu.org/licenses/>. | 
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|  | 17 | # | 
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|  | 18 | # Force Annealing with Ising model | 
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|  | 19 |  | 
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|  | 20 | AT_SETUP([Python externalization - Force Annealing without bondgraph on 2-body Ising model]) | 
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|  | 21 | AT_KEYWORDS([python force-annealing ising]) | 
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|  | 22 |  | 
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|  | 23 | # we use forces from a simple Ising model with 2 "carbon" atoms in a row along the x axis | 
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|  | 24 |  | 
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|  | 25 | file=two_carbon_test.data | 
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| [90ece9] | 26 | AT_CHECK([../../run ${abs_top_srcdir}/tests/Python/ForceAnnealing/pre/ising_model_chain.py ./$file ./ 3 2 "0"], 0, [stdout], [ignore]) | 
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| [075357] | 27 | AT_CHECK([grep "Largest remaining force components.*e-05" stdout], 0, [ignore], [ignore]) | 
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|  | 28 | AT_CHECK([diff $file ${abs_top_srcdir}/tests/Python/ForceAnnealing/post/two_carbon_test_no-bondgraph.data], 0, [ignore], [ignore]) | 
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|  | 29 |  | 
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|  | 30 | AT_CLEANUP | 
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|  | 31 |  | 
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|  | 32 | AT_SETUP([Python externalization - Force Annealing without bondgraph on 5-body Ising model]) | 
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|  | 33 | AT_KEYWORDS([python force-annealing ising]) | 
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|  | 34 |  | 
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|  | 35 | # we use forces from a simple Ising model with 5 "carbon" atoms in a row along the x axis | 
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|  | 36 |  | 
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|  | 37 | file=five_carbon_test.data | 
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| [90ece9] | 38 | AT_CHECK([../../run ${abs_top_srcdir}/tests/Python/ForceAnnealing/pre/ising_model_chain.py ./$file ./ 15 5 "0"], 0, [stdout], [ignore]) | 
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| [8450da] | 39 | AT_CHECK([grep "Largest remaining force components.*e-05" stdout], 0, [ignore], [ignore]) | 
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| [075357] | 40 | AT_CHECK([diff $file ${abs_top_srcdir}/tests/Python/ForceAnnealing/post/five_carbon_test_no-bondgraph.data], 0, [ignore], [ignore]) | 
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|  | 41 |  | 
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|  | 42 | AT_CLEANUP | 
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|  | 43 |  | 
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|  | 44 | AT_SETUP([Python externalization - Force Annealing with bondgraph on 2-body Ising model]) | 
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|  | 45 | AT_KEYWORDS([python force-annealing ising bondgraph]) | 
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| [6a5921] | 46 | AT_SKIP_IF([/bin/true]) | 
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|  | 47 | #AT_SKIP_IF([../../run ${abs_top_srcdir}/tests/Python/numpy_check.py]) | 
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| [075357] | 48 |  | 
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|  | 49 | # we use forces from a simple Ising model with 2 "carbon" atoms in a row along the x axis | 
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|  | 50 |  | 
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|  | 51 | file=two_carbon_test.data | 
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| [441d40] | 52 | AT_CHECK([../../run ${abs_top_srcdir}/tests/Python/ForceAnnealing/pre/ising_model_chain.py ./$file ./ 3 2 "1"], 0, [stdout], [ignore]) | 
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| [075357] | 53 | AT_CHECK([grep "Largest remaining force components.*e-05" stdout], 0, [ignore], [ignore]) | 
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|  | 54 | AT_CHECK([diff $file ${abs_top_srcdir}/tests/Python/ForceAnnealing/post/two_carbon_test_bondgraph.data], 0, [ignore], [ignore]) | 
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|  | 55 |  | 
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|  | 56 | AT_CLEANUP | 
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|  | 57 |  | 
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|  | 58 | AT_SETUP([Python externalization - Force Annealing with bondgraph on 5-body Ising model]) | 
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|  | 59 | AT_KEYWORDS([python force-annealing ising bondgraph]) | 
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| [6a5921] | 60 | AT_SKIP_IF([/bin/true]) | 
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|  | 61 | #AT_SKIP_IF([../../run ${abs_top_srcdir}/tests/Python/numpy_check.py]) | 
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| [075357] | 62 |  | 
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|  | 63 | # we use forces from a simple Ising model with 5 "carbon" atoms in a row along the x axis | 
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|  | 64 |  | 
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|  | 65 | file=five_carbon_test.data | 
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| [441d40] | 66 | AT_CHECK([../../run ${abs_top_srcdir}/tests/Python/ForceAnnealing/pre/ising_model_chain.py ./$file ./ 15 5 "1"], 0, [stdout], [ignore]) | 
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|  | 67 | AT_CHECK([grep "Largest remaining force components.*e-05" stdout], 0, [ignore], [ignore]) | 
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| [075357] | 68 | AT_CHECK([diff $file ${abs_top_srcdir}/tests/Python/ForceAnnealing/post/five_carbon_test_bondgraph.data], 0, [ignore], [ignore]) | 
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|  | 69 |  | 
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|  | 70 | AT_CLEANUP | 
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