source: src@ 6e9353

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 Candidate_v1.7.0 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Name Size Rev Age Author Last Change
../
analyzer.cpp 22.2 KB ​ f05407   17 years FrederikHeber analyzer has been adapted to the aforementioned change in the calling …
atom.cpp 2.7 KB ​ 362b0e   17 years FrederikHeber Adaptivity fixes, MD by VerletForceIntegration introduced, MD …
bond.cpp 3.9 KB ​ fa40b5   17 years FrederikHeber these are all smaller fixes due to extensively enabled compiler …
boundary.cpp 45.4 KB ​ ed060e   17 years FrederikHeber moved all definitions from boundary.hpp to molecules.hpp, and renamed …
boundary.hpp 2.5 KB ​ ed060e   17 years FrederikHeber moved all definitions from boundary.hpp to molecules.hpp, and renamed …
builder.cpp 59.8 KB ​ 6e9353   17 years FrederikHeber Constrained Molecular Dynamics: two new functions …
config.cpp 65.1 KB ​ 6e9353   17 years FrederikHeber Constrained Molecular Dynamics: two new functions …
datacreator.cpp 28.3 KB ​ fb9364   17 years FrederikHeber The entries in the Header of ForceMatrix are now separated by tabs, …
datacreator.hpp 4.0 KB ​ 390248   17 years FrederikHeber BIG change: Hcorrection included and bugfix of analyzer (wrt forces) …
defs.hpp 4.1 KB ​ 698b04   17 years FrederikHeber new function: molecule::OutputTemperatureFromTrajectories() stores …
element.cpp 1.4 KB ​ 68cb0f   17 years FrederikHeber introduced shieldings to analyzer and joiner both now handle …
elements.db 4.4 KB ​ 14de469   18 years FrederikHeber -initial commit -Minimum set of files needed from ESPACK SVN …
graph.cpp 266 bytes ​ 14de469   18 years FrederikHeber -initial commit -Minimum set of files needed from ESPACK SVN …
Hbondangle.db 161 bytes ​ 9e5a04d   17 years FrederikHeber Included missing silicon and took more or lesss sensible values for …
Hbonddistance.db 188 bytes ​ 9e5a04d   17 years FrederikHeber Included missing silicon and took more or lesss sensible values for …
helpers.cpp 5.3 KB ​ 8f019c   17 years FrederikHeber Splitting MatrrixContainer::ParseMatrix in ParseMatrix ParseMatrix …
helpers.hpp 8.2 KB ​ bc84e47   17 years FrederikHeber cosmetics
joiner.cpp 8.1 KB ​ 8f019c   17 years FrederikHeber Splitting MatrrixContainer::ParseMatrix in ParseMatrix ParseMatrix …
Makefile.am 855 bytes ​ 362b0e   17 years FrederikHeber Adaptivity fixes, MD by VerletForceIntegration introduced, MD …
moleculelist.cpp 31.3 KB ​ c1fc22   17 years FrederikHeber config::SaveMPQC() included in headers and used in …
molecules.cpp 214.9 KB ​ 6e9353   17 years FrederikHeber Constrained Molecular Dynamics: two new functions …
molecules.hpp 17.7 KB ​ 6e9353   17 years FrederikHeber Constrained Molecular Dynamics: two new functions …
orbitals.db 442 bytes ​ 9e5a04d   17 years FrederikHeber Included missing silicon and took more or lesss sensible values for …
parser.cpp 32.2 KB ​ 8f019c   17 years FrederikHeber Splitting MatrrixContainer::ParseMatrix in ParseMatrix ParseMatrix …
parser.hpp 3.5 KB ​ 8f019c   17 years FrederikHeber Splitting MatrrixContainer::ParseMatrix in ParseMatrix ParseMatrix …
periodentafel.cpp 9.7 KB ​ 82cd9f   17 years FrederikHeber BUGFIX: elements.db is now using path instead of file elements …
periodentafel.hpp 2.5 KB ​ 82cd9f   17 years FrederikHeber BUGFIX: elements.db is now using path instead of file elements …
stackclass.hpp 9.0 KB ​ 7f3b9d   17 years FrederikHeber Lots of for loops now count in reverse order where it does not matter, …
valence.db 1.5 KB ​ 14de469   18 years FrederikHeber -initial commit -Minimum set of files needed from ESPACK SVN …
vector.cpp 24.5 KB ​ 2985c8   17 years FrederikHeber BUGFIX: Normalize() would try to normalize a zero vector which ended …
vector.hpp 2.0 KB ​ e9b8bb   17 years FrederikHeber Rename of class vector to Vector to avoid conflict with vector from STL.
verbose.cpp 1.7 KB ​ 7f3b9d   17 years FrederikHeber Lots of for loops now count in reverse order where it does not matter, …
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