| [c4d4df] | 1 | /*
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 | 2 |  * AnalysisPairCorrelationUnitTest.cpp
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 | 3 |  *
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 | 4 |  *  Created on: Oct 13, 2009
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 | 5 |  *      Author: heber
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 | 6 |  */
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 | 7 | 
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 | 8 | using namespace std;
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 | 9 | 
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 | 10 | #include <cppunit/CompilerOutputter.h>
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 | 11 | #include <cppunit/extensions/TestFactoryRegistry.h>
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 | 12 | #include <cppunit/ui/text/TestRunner.h>
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 | 13 | 
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 | 14 | #include "analysis_correlation.hpp"
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 | 15 | #include "AnalysisPairCorrelationUnitTest.hpp"
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 | 16 | 
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 | 17 | #include "atom.hpp"
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 | 18 | #include "boundary.hpp"
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 | 19 | #include "element.hpp"
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 | 20 | #include "molecule.hpp"
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 | 21 | #include "linkedcell.hpp"
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 | 22 | #include "periodentafel.hpp"
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 | 23 | #include "tesselation.hpp"
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 | 24 | 
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 | 25 | /********************************************** Test classes **************************************/
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 | 26 | 
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 | 27 | // Registers the fixture into the 'registry'
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 | 28 | CPPUNIT_TEST_SUITE_REGISTRATION( AnalysisPairCorrelationUnitTest );
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 | 29 | 
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 | 30 | 
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 | 31 | void AnalysisPairCorrelationUnitTest::setUp()
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 | 32 | {
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 | 33 |   atom *Walker = NULL;
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 | 34 | 
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 | 35 |   // init private all pointers to zero
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| [a5551b] | 36 |   TestList = NULL;
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| [c4d4df] | 37 |   TestMolecule = NULL;
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 | 38 |   hydrogen = NULL;
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 | 39 |   tafel = NULL;
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 | 40 |   correlationmap = NULL;
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 | 41 |   binmap = NULL;
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 | 42 | 
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 | 43 |   // construct element
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 | 44 |   hydrogen = new element;
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 | 45 |   hydrogen->Z = 1;
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 | 46 |   strcpy(hydrogen->name, "hydrogen");
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| [bbc338] | 47 |   strcpy(hydrogen->symbol, "H");
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| [c4d4df] | 48 | 
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 | 49 |   // construct periodentafel
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 | 50 |   tafel = new periodentafel;
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 | 51 |   tafel->AddElement(hydrogen);
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 | 52 | 
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 | 53 |   // construct molecule (tetraeder of hydrogens)
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 | 54 |   TestMolecule = new molecule(tafel);
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 | 55 |   Walker = new atom();
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 | 56 |   Walker->type = hydrogen;
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 | 57 |   Walker->node->Init(1., 0., 1. );
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 | 58 |   TestMolecule->AddAtom(Walker);
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 | 59 |   Walker = new atom();
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 | 60 |   Walker->type = hydrogen;
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 | 61 |   Walker->node->Init(0., 1., 1. );
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 | 62 |   TestMolecule->AddAtom(Walker);
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 | 63 |   Walker = new atom();
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 | 64 |   Walker->type = hydrogen;
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 | 65 |   Walker->node->Init(1., 1., 0. );
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 | 66 |   TestMolecule->AddAtom(Walker);
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 | 67 |   Walker = new atom();
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 | 68 |   Walker->type = hydrogen;
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 | 69 |   Walker->node->Init(0., 0., 0. );
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 | 70 |   TestMolecule->AddAtom(Walker);
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 | 71 | 
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 | 72 |   // check that TestMolecule was correctly constructed
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 | 73 |   CPPUNIT_ASSERT_EQUAL( TestMolecule->AtomCount, 4 );
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 | 74 | 
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| [a5551b] | 75 |   TestList = new MoleculeListClass;
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 | 76 |   TestMolecule->ActiveFlag = true;
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 | 77 |   TestList->insert(TestMolecule);
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 | 78 | 
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| [c4d4df] | 79 |   // init maps
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| [e138de] | 80 |   correlationmap = PairCorrelation( TestList, hydrogen, hydrogen );
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| [c4d4df] | 81 |   binmap = NULL;
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 | 82 | 
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 | 83 | };
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 | 84 | 
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 | 85 | 
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 | 86 | void AnalysisPairCorrelationUnitTest::tearDown()
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 | 87 | {
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 | 88 |   if (correlationmap != NULL)
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 | 89 |     delete(correlationmap);
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 | 90 |   if (binmap != NULL)
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 | 91 |     delete(binmap);
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 | 92 | 
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 | 93 |   // remove
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| [a5551b] | 94 |   delete(TestList);
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| [c4d4df] | 95 |   // note that all the atoms are cleaned by TestMolecule
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 | 96 |   delete(tafel);
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 | 97 |   // note that element is cleaned by periodentafel
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 | 98 | };
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 | 99 | 
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 | 100 | void AnalysisPairCorrelationUnitTest::PairCorrelationTest()
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 | 101 | {
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 | 102 |   // do the pair correlation
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 | 103 |   CPPUNIT_ASSERT( correlationmap != NULL );
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 | 104 |   CPPUNIT_ASSERT_EQUAL( (size_t)6, correlationmap->size() );
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 | 105 | };
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 | 106 | 
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 | 107 | void AnalysisPairCorrelationUnitTest::PairCorrelationBinNoRangeTest()
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 | 108 | {
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 | 109 |   BinPairMap::iterator tester;
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 | 110 |   // put pair correlation into bins and check with no range
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| [e138de] | 111 |   binmap = BinData( correlationmap, 0.5, 0., 0. );
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| [c4d4df] | 112 |   CPPUNIT_ASSERT_EQUAL( (size_t)1, binmap->size() );
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| [e138de] | 113 |   //OutputCorrelation ( binmap );
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| [c4d4df] | 114 |   tester = binmap->begin();
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 | 115 |   CPPUNIT_ASSERT_EQUAL( sqrt(2.), tester->first );
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 | 116 |   CPPUNIT_ASSERT_EQUAL( 6, tester->second );
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 | 117 | };
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 | 118 | 
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 | 119 | void AnalysisPairCorrelationUnitTest::PairCorrelationBinRangeTest()
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 | 120 | {
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 | 121 |   BinPairMap::iterator tester;
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 | 122 |   // ... and check with [0., 2.] range
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| [e138de] | 123 |   binmap = BinData( correlationmap, 0.5, 0., 2. );
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| [c4d4df] | 124 |   CPPUNIT_ASSERT_EQUAL( (size_t)5, binmap->size() );
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| [e138de] | 125 |   //OutputCorrelation ( binmap );
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| [c4d4df] | 126 |   tester = binmap->begin();
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 | 127 |   CPPUNIT_ASSERT_EQUAL( 0., tester->first );
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 | 128 |   tester = binmap->find(1.);
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 | 129 |   CPPUNIT_ASSERT_EQUAL( 1., tester->first );
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 | 130 |   CPPUNIT_ASSERT_EQUAL( 6, tester->second );
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 | 131 | };
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 | 132 | 
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 | 133 | /********************************************** Main routine **************************************/
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 | 134 | 
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 | 135 | int main(int argc, char **argv)
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 | 136 | {
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 | 137 |   // Get the top level suite from the registry
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 | 138 |   CppUnit::Test *suite = CppUnit::TestFactoryRegistry::getRegistry().makeTest();
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 | 139 | 
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 | 140 |   // Adds the test to the list of test to run
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 | 141 |   CppUnit::TextUi::TestRunner runner;
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 | 142 |   runner.addTest( suite );
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 | 143 | 
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 | 144 |   // Change the default outputter to a compiler error format outputter
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 | 145 |   runner.setOutputter( new CppUnit::CompilerOutputter( &runner.result(),
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 | 146 |                                                        std::cerr ) );
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 | 147 |   // Run the tests.
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 | 148 |   bool wasSucessful = runner.run();
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 | 149 | 
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 | 150 |   // Return error code 1 if the one of test failed.
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 | 151 |   return wasSucessful ? 0 : 1;
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 | 152 | };
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