| [c4d4df] | 1 | /* | 
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|  | 2 | * AnalysisPairCorrelationUnitTest.cpp | 
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|  | 3 | * | 
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|  | 4 | *  Created on: Oct 13, 2009 | 
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|  | 5 | *      Author: heber | 
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|  | 6 | */ | 
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|  | 7 |  | 
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|  | 8 | using namespace std; | 
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|  | 9 |  | 
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|  | 10 | #include <cppunit/CompilerOutputter.h> | 
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|  | 11 | #include <cppunit/extensions/TestFactoryRegistry.h> | 
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|  | 12 | #include <cppunit/ui/text/TestRunner.h> | 
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|  | 13 |  | 
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|  | 14 | #include "analysis_correlation.hpp" | 
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|  | 15 | #include "AnalysisPairCorrelationUnitTest.hpp" | 
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|  | 16 |  | 
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|  | 17 | #include "atom.hpp" | 
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|  | 18 | #include "boundary.hpp" | 
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|  | 19 | #include "element.hpp" | 
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|  | 20 | #include "molecule.hpp" | 
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|  | 21 | #include "linkedcell.hpp" | 
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|  | 22 | #include "periodentafel.hpp" | 
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|  | 23 | #include "tesselation.hpp" | 
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|  | 24 |  | 
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|  | 25 | /********************************************** Test classes **************************************/ | 
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|  | 26 |  | 
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|  | 27 | // Registers the fixture into the 'registry' | 
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|  | 28 | CPPUNIT_TEST_SUITE_REGISTRATION( AnalysisPairCorrelationUnitTest ); | 
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|  | 29 |  | 
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|  | 30 |  | 
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|  | 31 | void AnalysisPairCorrelationUnitTest::setUp() | 
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|  | 32 | { | 
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|  | 33 | atom *Walker = NULL; | 
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|  | 34 |  | 
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|  | 35 | // init private all pointers to zero | 
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| [a5551b] | 36 | TestList = NULL; | 
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| [c4d4df] | 37 | TestMolecule = NULL; | 
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|  | 38 | hydrogen = NULL; | 
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|  | 39 | tafel = NULL; | 
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|  | 40 | correlationmap = NULL; | 
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|  | 41 | binmap = NULL; | 
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|  | 42 |  | 
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|  | 43 | // construct element | 
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|  | 44 | hydrogen = new element; | 
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|  | 45 | hydrogen->Z = 1; | 
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|  | 46 | strcpy(hydrogen->name, "hydrogen"); | 
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| [bbc338] | 47 | strcpy(hydrogen->symbol, "H"); | 
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| [c4d4df] | 48 |  | 
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|  | 49 | // construct periodentafel | 
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|  | 50 | tafel = new periodentafel; | 
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|  | 51 | tafel->AddElement(hydrogen); | 
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|  | 52 |  | 
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|  | 53 | // construct molecule (tetraeder of hydrogens) | 
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|  | 54 | TestMolecule = new molecule(tafel); | 
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|  | 55 | Walker = new atom(); | 
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|  | 56 | Walker->type = hydrogen; | 
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|  | 57 | Walker->node->Init(1., 0., 1. ); | 
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|  | 58 | TestMolecule->AddAtom(Walker); | 
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|  | 59 | Walker = new atom(); | 
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|  | 60 | Walker->type = hydrogen; | 
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|  | 61 | Walker->node->Init(0., 1., 1. ); | 
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|  | 62 | TestMolecule->AddAtom(Walker); | 
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|  | 63 | Walker = new atom(); | 
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|  | 64 | Walker->type = hydrogen; | 
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|  | 65 | Walker->node->Init(1., 1., 0. ); | 
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|  | 66 | TestMolecule->AddAtom(Walker); | 
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|  | 67 | Walker = new atom(); | 
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|  | 68 | Walker->type = hydrogen; | 
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|  | 69 | Walker->node->Init(0., 0., 0. ); | 
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|  | 70 | TestMolecule->AddAtom(Walker); | 
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|  | 71 |  | 
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|  | 72 | // check that TestMolecule was correctly constructed | 
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|  | 73 | CPPUNIT_ASSERT_EQUAL( TestMolecule->AtomCount, 4 ); | 
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|  | 74 |  | 
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| [a5551b] | 75 | TestList = new MoleculeListClass; | 
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|  | 76 | TestMolecule->ActiveFlag = true; | 
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|  | 77 | TestList->insert(TestMolecule); | 
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|  | 78 |  | 
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| [c4d4df] | 79 | // init maps | 
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| [e138de] | 80 | correlationmap = PairCorrelation( TestList, hydrogen, hydrogen ); | 
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| [c4d4df] | 81 | binmap = NULL; | 
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|  | 82 |  | 
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|  | 83 | }; | 
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|  | 84 |  | 
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|  | 85 |  | 
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|  | 86 | void AnalysisPairCorrelationUnitTest::tearDown() | 
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|  | 87 | { | 
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|  | 88 | if (correlationmap != NULL) | 
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|  | 89 | delete(correlationmap); | 
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|  | 90 | if (binmap != NULL) | 
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|  | 91 | delete(binmap); | 
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|  | 92 |  | 
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|  | 93 | // remove | 
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| [a5551b] | 94 | delete(TestList); | 
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| [c4d4df] | 95 | // note that all the atoms are cleaned by TestMolecule | 
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|  | 96 | delete(tafel); | 
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|  | 97 | // note that element is cleaned by periodentafel | 
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|  | 98 | }; | 
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|  | 99 |  | 
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|  | 100 | void AnalysisPairCorrelationUnitTest::PairCorrelationTest() | 
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|  | 101 | { | 
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|  | 102 | // do the pair correlation | 
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|  | 103 | CPPUNIT_ASSERT( correlationmap != NULL ); | 
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|  | 104 | CPPUNIT_ASSERT_EQUAL( (size_t)6, correlationmap->size() ); | 
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|  | 105 | }; | 
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|  | 106 |  | 
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|  | 107 | void AnalysisPairCorrelationUnitTest::PairCorrelationBinNoRangeTest() | 
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|  | 108 | { | 
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|  | 109 | BinPairMap::iterator tester; | 
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|  | 110 | // put pair correlation into bins and check with no range | 
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| [e138de] | 111 | binmap = BinData( correlationmap, 0.5, 0., 0. ); | 
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| [c4d4df] | 112 | CPPUNIT_ASSERT_EQUAL( (size_t)1, binmap->size() ); | 
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| [e138de] | 113 | //OutputCorrelation ( binmap ); | 
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| [c4d4df] | 114 | tester = binmap->begin(); | 
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|  | 115 | CPPUNIT_ASSERT_EQUAL( sqrt(2.), tester->first ); | 
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|  | 116 | CPPUNIT_ASSERT_EQUAL( 6, tester->second ); | 
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|  | 117 | }; | 
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|  | 118 |  | 
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|  | 119 | void AnalysisPairCorrelationUnitTest::PairCorrelationBinRangeTest() | 
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|  | 120 | { | 
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|  | 121 | BinPairMap::iterator tester; | 
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|  | 122 | // ... and check with [0., 2.] range | 
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| [e138de] | 123 | binmap = BinData( correlationmap, 0.5, 0., 2. ); | 
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| [c4d4df] | 124 | CPPUNIT_ASSERT_EQUAL( (size_t)5, binmap->size() ); | 
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| [e138de] | 125 | //OutputCorrelation ( binmap ); | 
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| [c4d4df] | 126 | tester = binmap->begin(); | 
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|  | 127 | CPPUNIT_ASSERT_EQUAL( 0., tester->first ); | 
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|  | 128 | tester = binmap->find(1.); | 
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|  | 129 | CPPUNIT_ASSERT_EQUAL( 1., tester->first ); | 
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|  | 130 | CPPUNIT_ASSERT_EQUAL( 6, tester->second ); | 
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|  | 131 | }; | 
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|  | 132 |  | 
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|  | 133 | /********************************************** Main routine **************************************/ | 
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|  | 134 |  | 
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|  | 135 | int main(int argc, char **argv) | 
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|  | 136 | { | 
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|  | 137 | // Get the top level suite from the registry | 
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|  | 138 | CppUnit::Test *suite = CppUnit::TestFactoryRegistry::getRegistry().makeTest(); | 
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|  | 139 |  | 
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|  | 140 | // Adds the test to the list of test to run | 
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|  | 141 | CppUnit::TextUi::TestRunner runner; | 
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|  | 142 | runner.addTest( suite ); | 
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|  | 143 |  | 
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|  | 144 | // Change the default outputter to a compiler error format outputter | 
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|  | 145 | runner.setOutputter( new CppUnit::CompilerOutputter( &runner.result(), | 
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|  | 146 | std::cerr ) ); | 
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|  | 147 | // Run the tests. | 
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|  | 148 | bool wasSucessful = runner.run(); | 
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|  | 149 |  | 
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|  | 150 | // Return error code 1 if the one of test failed. | 
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|  | 151 | return wasSucessful ? 0 : 1; | 
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|  | 152 | }; | 
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