| 1 | /*
|
|---|
| 2 | * tesselation.hpp
|
|---|
| 3 | *
|
|---|
| 4 | * The tesselation class is meant to contain the envelope (concave, convex or neither) of a set of Vectors. As we actually mean this stuff for atoms, we have to encapsulate it all a bit.
|
|---|
| 5 | *
|
|---|
| 6 | * Created on: Aug 3, 2009
|
|---|
| 7 | * Author: heber
|
|---|
| 8 | */
|
|---|
| 9 |
|
|---|
| 10 | #ifndef TESSELATION_HPP_
|
|---|
| 11 | #define TESSELATION_HPP_
|
|---|
| 12 |
|
|---|
| 13 | using namespace std;
|
|---|
| 14 |
|
|---|
| 15 | /*********************************************** includes ***********************************/
|
|---|
| 16 |
|
|---|
| 17 | // include config.h
|
|---|
| 18 | #ifdef HAVE_CONFIG_H
|
|---|
| 19 | #include <config.h>
|
|---|
| 20 | #endif
|
|---|
| 21 |
|
|---|
| 22 | #include <map>
|
|---|
| 23 | #include <list>
|
|---|
| 24 | #include <set>
|
|---|
| 25 |
|
|---|
| 26 | #include "vector.hpp"
|
|---|
| 27 | #include "helpers.hpp"
|
|---|
| 28 |
|
|---|
| 29 | /****************************************** forward declarations *****************************/
|
|---|
| 30 |
|
|---|
| 31 | class BoundaryPointSet;
|
|---|
| 32 | class BoundaryLineSet;
|
|---|
| 33 | class BoundaryTriangleSet;
|
|---|
| 34 | class LinkedCell;
|
|---|
| 35 | class TesselPoint;
|
|---|
| 36 | class PointCloud;
|
|---|
| 37 | class Tesselation;
|
|---|
| 38 |
|
|---|
| 39 | /********************************************** definitions *********************************/
|
|---|
| 40 |
|
|---|
| 41 | #define DoTecplotOutput 1
|
|---|
| 42 | #define DoRaster3DOutput 1
|
|---|
| 43 | #define DoVRMLOutput 1
|
|---|
| 44 | #define TecplotSuffix ".dat"
|
|---|
| 45 | #define Raster3DSuffix ".r3d"
|
|---|
| 46 | #define VRMLSUffix ".wrl"
|
|---|
| 47 |
|
|---|
| 48 | // ======================================================= some template functions =========================================
|
|---|
| 49 |
|
|---|
| 50 | #define PointMap map < int, class BoundaryPointSet * >
|
|---|
| 51 | #define PointPair pair < int, class BoundaryPointSet * >
|
|---|
| 52 | #define PointTestPair pair < PointMap::iterator, bool >
|
|---|
| 53 | #define CandidateList list <class CandidateForTesselation *>
|
|---|
| 54 |
|
|---|
| 55 | #define LineMap multimap < int, class BoundaryLineSet * >
|
|---|
| 56 | #define LinePair pair < int, class BoundaryLineSet * >
|
|---|
| 57 | #define LineTestPair pair < LineMap::iterator, bool >
|
|---|
| 58 |
|
|---|
| 59 | #define TriangleMap map < int, class BoundaryTriangleSet * >
|
|---|
| 60 | #define TrianglePair pair < int, class BoundaryTriangleSet * >
|
|---|
| 61 | #define TriangleTestPair pair < TrianglePair::iterator, bool >
|
|---|
| 62 |
|
|---|
| 63 | #define DistanceMultiMap multimap <double, pair < PointMap::iterator, PointMap::iterator> >
|
|---|
| 64 | #define DistanceMultiMapPair pair <double, pair < PointMap::iterator, PointMap::iterator> >
|
|---|
| 65 |
|
|---|
| 66 | /********************************************** declarations *******************************/
|
|---|
| 67 |
|
|---|
| 68 | template <typename T> void SetEndpointsOrdered(T endpoints[2], T endpoint1, T endpoint2)
|
|---|
| 69 | {
|
|---|
| 70 | if (endpoint1->Nr < endpoint2->Nr) {
|
|---|
| 71 | endpoints[0] = endpoint1;
|
|---|
| 72 | endpoints[1] = endpoint2;
|
|---|
| 73 | } else {
|
|---|
| 74 | endpoints[0] = endpoint2;
|
|---|
| 75 | endpoints[1] = endpoint1;
|
|---|
| 76 | }
|
|---|
| 77 | };
|
|---|
| 78 |
|
|---|
| 79 | // ======================================================== class BoundaryPointSet =========================================
|
|---|
| 80 |
|
|---|
| 81 | class BoundaryPointSet {
|
|---|
| 82 | public:
|
|---|
| 83 | BoundaryPointSet();
|
|---|
| 84 | BoundaryPointSet(TesselPoint *Walker);
|
|---|
| 85 | ~BoundaryPointSet();
|
|---|
| 86 |
|
|---|
| 87 | void AddLine(class BoundaryLineSet *line);
|
|---|
| 88 |
|
|---|
| 89 | LineMap lines;
|
|---|
| 90 | int LinesCount;
|
|---|
| 91 | TesselPoint *node;
|
|---|
| 92 | double value;
|
|---|
| 93 | int Nr;
|
|---|
| 94 | };
|
|---|
| 95 |
|
|---|
| 96 | ostream & operator << (ostream &ost, BoundaryPointSet &a);
|
|---|
| 97 |
|
|---|
| 98 | // ======================================================== class BoundaryLineSet ==========================================
|
|---|
| 99 |
|
|---|
| 100 | class BoundaryLineSet {
|
|---|
| 101 | public:
|
|---|
| 102 | BoundaryLineSet();
|
|---|
| 103 | BoundaryLineSet(class BoundaryPointSet *Point[2], int number);
|
|---|
| 104 | ~BoundaryLineSet();
|
|---|
| 105 |
|
|---|
| 106 | void AddTriangle(class BoundaryTriangleSet *triangle);
|
|---|
| 107 | bool IsConnectedTo(class BoundaryLineSet *line);
|
|---|
| 108 | bool ContainsBoundaryPoint(class BoundaryPointSet *point);
|
|---|
| 109 | bool CheckConvexityCriterion(ofstream *out);
|
|---|
| 110 | class BoundaryPointSet *GetOtherEndpoint(class BoundaryPointSet *);
|
|---|
| 111 |
|
|---|
| 112 | class BoundaryPointSet *endpoints[2];
|
|---|
| 113 | TriangleMap triangles;
|
|---|
| 114 | int Nr;
|
|---|
| 115 | };
|
|---|
| 116 |
|
|---|
| 117 | ostream & operator << (ostream &ost, BoundaryLineSet &a);
|
|---|
| 118 |
|
|---|
| 119 | // ======================================================== class BoundaryTriangleSet =======================================
|
|---|
| 120 |
|
|---|
| 121 | class BoundaryTriangleSet {
|
|---|
| 122 | public:
|
|---|
| 123 | BoundaryTriangleSet();
|
|---|
| 124 | BoundaryTriangleSet(class BoundaryLineSet *line[3], int number);
|
|---|
| 125 | ~BoundaryTriangleSet();
|
|---|
| 126 |
|
|---|
| 127 | void GetNormalVector(Vector &NormalVector);
|
|---|
| 128 | void GetCenter(Vector *center);
|
|---|
| 129 | bool GetIntersectionInsideTriangle(ofstream *out, Vector *MolCenter, Vector *x, Vector *Intersection);
|
|---|
| 130 | bool ContainsBoundaryLine(class BoundaryLineSet *line);
|
|---|
| 131 | bool ContainsBoundaryPoint(class BoundaryPointSet *point);
|
|---|
| 132 | bool ContainsBoundaryPoint(class TesselPoint *point);
|
|---|
| 133 | class BoundaryPointSet *GetThirdEndpoint(class BoundaryLineSet *line);
|
|---|
| 134 | bool IsPresentTupel(class BoundaryPointSet *Points[3]);
|
|---|
| 135 | bool IsPresentTupel(class BoundaryTriangleSet *T);
|
|---|
| 136 |
|
|---|
| 137 | class BoundaryPointSet *endpoints[3];
|
|---|
| 138 | class BoundaryLineSet *lines[3];
|
|---|
| 139 | Vector NormalVector;
|
|---|
| 140 | int Nr;
|
|---|
| 141 | };
|
|---|
| 142 |
|
|---|
| 143 | ostream & operator << (ostream &ost, BoundaryTriangleSet &a);
|
|---|
| 144 |
|
|---|
| 145 | // =========================================================== class TESSELPOINT ===========================================
|
|---|
| 146 |
|
|---|
| 147 | class ParticleInfo {
|
|---|
| 148 | public:
|
|---|
| 149 | int nr; // index to easierly identify
|
|---|
| 150 | char *Name; // some name to reference to on output
|
|---|
| 151 |
|
|---|
| 152 | ParticleInfo();
|
|---|
| 153 | ~ParticleInfo();
|
|---|
| 154 |
|
|---|
| 155 | ostream & operator << (ostream &ost);
|
|---|
| 156 |
|
|---|
| 157 | private:
|
|---|
| 158 | };
|
|---|
| 159 |
|
|---|
| 160 | ostream & operator << (ostream &ost, const ParticleInfo &a);
|
|---|
| 161 |
|
|---|
| 162 | /** Is a single point of the set of Vectors, also a super-class to be inherited and and its functions to be implemented.
|
|---|
| 163 | */
|
|---|
| 164 | class TesselPoint : virtual public ParticleInfo {
|
|---|
| 165 | public:
|
|---|
| 166 | TesselPoint();
|
|---|
| 167 | virtual ~TesselPoint();
|
|---|
| 168 |
|
|---|
| 169 | Vector *node; // pointer to position of the dot in space
|
|---|
| 170 |
|
|---|
| 171 | virtual ostream & operator << (ostream &ost);
|
|---|
| 172 | };
|
|---|
| 173 |
|
|---|
| 174 | ostream & operator << (ostream &ost, const TesselPoint &a);
|
|---|
| 175 |
|
|---|
| 176 | // =========================================================== class POINTCLOUD ============================================
|
|---|
| 177 |
|
|---|
| 178 | /** Super-class for all point clouds structures, also molecules. They have to inherit this structure and implement the virtual function to access the Vectors.
|
|---|
| 179 | * This basically encapsulates a list structure.
|
|---|
| 180 | */
|
|---|
| 181 | class PointCloud {
|
|---|
| 182 | public:
|
|---|
| 183 | PointCloud();
|
|---|
| 184 | virtual ~PointCloud();
|
|---|
| 185 |
|
|---|
| 186 | virtual Vector *GetCenter(ofstream *out) { return NULL; };
|
|---|
| 187 | virtual TesselPoint *GetPoint() { return NULL; };
|
|---|
| 188 | virtual TesselPoint *GetTerminalPoint() { return NULL; };
|
|---|
| 189 | virtual void GoToNext() {};
|
|---|
| 190 | virtual void GoToPrevious() {};
|
|---|
| 191 | virtual void GoToFirst() {};
|
|---|
| 192 | virtual void GoToLast() {};
|
|---|
| 193 | virtual bool IsEmpty() { return false; };
|
|---|
| 194 | virtual bool IsEnd() { return false; };
|
|---|
| 195 | };
|
|---|
| 196 |
|
|---|
| 197 | // ======================================================== class CandidateForTesselation =========================================
|
|---|
| 198 |
|
|---|
| 199 | class CandidateForTesselation {
|
|---|
| 200 | public :
|
|---|
| 201 | CandidateForTesselation(TesselPoint* candidate, BoundaryLineSet* currentBaseLine, Vector OptCandidateCenter, Vector OtherOptCandidateCenter);
|
|---|
| 202 | ~CandidateForTesselation();
|
|---|
| 203 |
|
|---|
| 204 | TesselPoint *point;
|
|---|
| 205 | BoundaryLineSet *BaseLine;
|
|---|
| 206 | Vector OptCenter;
|
|---|
| 207 | Vector OtherOptCenter;
|
|---|
| 208 | };
|
|---|
| 209 |
|
|---|
| 210 | // =========================================================== class TESSELATION ===========================================
|
|---|
| 211 |
|
|---|
| 212 | /** Contains the envelope to a PointCloud.
|
|---|
| 213 | */
|
|---|
| 214 | class Tesselation : public PointCloud {
|
|---|
| 215 | public:
|
|---|
| 216 |
|
|---|
| 217 | Tesselation();
|
|---|
| 218 | virtual ~Tesselation();
|
|---|
| 219 |
|
|---|
| 220 | void AddTesselationPoint(TesselPoint* Candidate, int n);
|
|---|
| 221 | void AddTesselationLine(class BoundaryPointSet *a, class BoundaryPointSet *b, int n);
|
|---|
| 222 | void AlwaysAddTesselationTriangleLine(class BoundaryPointSet *a, class BoundaryPointSet *b, int n);
|
|---|
| 223 | void AddTesselationTriangle();
|
|---|
| 224 | void AddTesselationTriangle(int nr);
|
|---|
| 225 | void RemoveTesselationTriangle(class BoundaryTriangleSet *triangle);
|
|---|
| 226 | void RemoveTesselationLine(class BoundaryLineSet *line);
|
|---|
| 227 | void RemoveTesselationPoint(class BoundaryPointSet *point);
|
|---|
| 228 |
|
|---|
| 229 | class BoundaryPointSet *GetCommonEndpoint(class BoundaryLineSet * line1, class BoundaryLineSet * line2);
|
|---|
| 230 |
|
|---|
| 231 | // concave envelope
|
|---|
| 232 | void FindStartingTriangle(ofstream *out, const double RADIUS, class LinkedCell *LC);
|
|---|
| 233 | void FindSecondPointForTesselation(class TesselPoint* a, Vector Oben, class TesselPoint*& OptCandidate, double Storage[3], double RADIUS, class LinkedCell *LC);
|
|---|
| 234 | void FindThirdPointForTesselation(Vector NormalVector, Vector SearchDirection, Vector OldSphereCenter, class BoundaryLineSet *BaseLine, class TesselPoint *ThirdNode, CandidateList* &candidates, double *ShortestAngle, const double RADIUS, class LinkedCell *LC);
|
|---|
| 235 | bool FindNextSuitableTriangle(ofstream *out, BoundaryLineSet &Line, BoundaryTriangleSet &T, const double& RADIUS, LinkedCell *LC);
|
|---|
| 236 | int CheckPresenceOfTriangle(ofstream *out, class TesselPoint *Candidates[3]);
|
|---|
| 237 | class BoundaryTriangleSet * GetPresentTriangle(ofstream *out, TesselPoint *Candidates[3]);
|
|---|
| 238 |
|
|---|
| 239 | // convex envelope
|
|---|
| 240 | void TesselateOnBoundary(ofstream *out, PointCloud *cloud);
|
|---|
| 241 | void GuessStartingTriangle(ofstream *out);
|
|---|
| 242 | bool InsertStraddlingPoints(ofstream *out, PointCloud *cloud, LinkedCell *LC);
|
|---|
| 243 | double RemovePointFromTesselatedSurface(ofstream *out, class BoundaryPointSet *point);
|
|---|
| 244 | class BoundaryLineSet * FlipBaseline(ofstream *out, class BoundaryLineSet *Base);
|
|---|
| 245 | double PickFarthestofTwoBaselines(ofstream *out, class BoundaryLineSet *Base);
|
|---|
| 246 | class BoundaryPointSet *IsConvexRectangle(ofstream *out, class BoundaryLineSet *Base);
|
|---|
| 247 | map<int, int> * FindAllDegeneratedTriangles();
|
|---|
| 248 | map<int, int> * FindAllDegeneratedLines();
|
|---|
| 249 | void RemoveDegeneratedTriangles();
|
|---|
| 250 | void AddBoundaryPointByDegeneratedTriangle(ofstream *out, class TesselPoint *point, LinkedCell *LC);
|
|---|
| 251 |
|
|---|
| 252 | set<TesselPoint*> * GetAllConnectedPoints(ofstream *out, TesselPoint* Point);
|
|---|
| 253 | set<BoundaryTriangleSet*> *GetAllTriangles(ofstream *out, class BoundaryPointSet *Point);
|
|---|
| 254 | list<list<TesselPoint*> *> * GetPathsOfConnectedPoints(ofstream *out, TesselPoint* Point);
|
|---|
| 255 | list<list<TesselPoint*> *> * GetClosedPathsOfConnectedPoints(ofstream *out, TesselPoint* Point);
|
|---|
| 256 | list<TesselPoint*> * GetCircleOfConnectedPoints(ofstream *out, TesselPoint* Point, Vector *Reference = NULL);
|
|---|
| 257 | list<BoundaryTriangleSet*> *FindTriangles(TesselPoint* Points[3]);
|
|---|
| 258 | list<BoundaryTriangleSet*> * FindClosestTrianglesToPoint(ofstream *out, Vector *x, LinkedCell* LC);
|
|---|
| 259 | class BoundaryTriangleSet * FindClosestTriangleToPoint(ofstream *out, Vector *x, LinkedCell* LC);
|
|---|
| 260 | bool IsInnerPoint(ofstream *out, Vector Point, LinkedCell* LC);
|
|---|
| 261 | bool IsInnerPoint(ofstream *out, TesselPoint *Point, LinkedCell* LC);
|
|---|
| 262 | bool AddBoundaryPoint(TesselPoint *Walker, int n);
|
|---|
| 263 |
|
|---|
| 264 | // print for debugging
|
|---|
| 265 | void PrintAllBoundaryPoints(ofstream *out);
|
|---|
| 266 | void PrintAllBoundaryLines(ofstream *out);
|
|---|
| 267 | void PrintAllBoundaryTriangles(ofstream *out);
|
|---|
| 268 |
|
|---|
| 269 | // store envelope in file
|
|---|
| 270 | void Output(ofstream *out, const char *filename, PointCloud *cloud);
|
|---|
| 271 |
|
|---|
| 272 | PointMap PointsOnBoundary;
|
|---|
| 273 | LineMap LinesOnBoundary;
|
|---|
| 274 | TriangleMap TrianglesOnBoundary;
|
|---|
| 275 | int PointsOnBoundaryCount;
|
|---|
| 276 | int LinesOnBoundaryCount;
|
|---|
| 277 | int TrianglesOnBoundaryCount;
|
|---|
| 278 |
|
|---|
| 279 | // PointCloud implementation for PointsOnBoundary
|
|---|
| 280 | virtual Vector *GetCenter(ofstream *out);
|
|---|
| 281 | virtual TesselPoint *GetPoint();
|
|---|
| 282 | virtual TesselPoint *GetTerminalPoint();
|
|---|
| 283 | virtual void GoToNext();
|
|---|
| 284 | virtual void GoToPrevious();
|
|---|
| 285 | virtual void GoToFirst();
|
|---|
| 286 | virtual void GoToLast();
|
|---|
| 287 | virtual bool IsEmpty();
|
|---|
| 288 | virtual bool IsEnd();
|
|---|
| 289 |
|
|---|
| 290 | class BoundaryPointSet *BPS[2];
|
|---|
| 291 | class BoundaryLineSet *BLS[3];
|
|---|
| 292 | class BoundaryTriangleSet *BTS;
|
|---|
| 293 | class BoundaryTriangleSet *LastTriangle;
|
|---|
| 294 | int TriangleFilesWritten;
|
|---|
| 295 |
|
|---|
| 296 | private:
|
|---|
| 297 | class BoundaryPointSet *TPS[3]; //this is a Storage for pointers to triangle points, this and BPS[2] needed due to AddLine restrictions
|
|---|
| 298 |
|
|---|
| 299 | PointMap::iterator InternalPointer;
|
|---|
| 300 | };
|
|---|
| 301 |
|
|---|
| 302 |
|
|---|
| 303 | #endif /* TESSELATION_HPP_ */
|
|---|