| [357fba] | 1 | /*
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 | 2 |  * linkedcell.hpp
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 | 3 |  *
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 | 4 |  *  If the linked cell should be usable, the class has to inherit LCNodeSet and the nodes (containing the Vectors) have to inherit LCNode. This works well
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 | 5 |  *  for molecule and atom classes.
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 | 6 |  *
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 | 7 |  *  Created on: Aug 3, 2009
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 | 8 |  *      Author: heber
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 | 9 |  */
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 | 10 | 
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| [e1bc68] | 11 | #ifndef LINKEDCELL_HPP_
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 | 12 | #define LINKEDCELL_HPP_
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 | 13 | 
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| [357fba] | 14 | using namespace std;
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 | 15 | 
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| [f66195] | 16 | /*********************************************** includes ***********************************/
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 | 17 | 
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| [e1bc68] | 18 | // include config.h
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 | 19 | #ifdef HAVE_CONFIG_H
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 | 20 | #include <config.h>
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 | 21 | #endif
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 | 22 | 
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| [357fba] | 23 | #include <list>
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| [af2c424] | 24 | #include <vector>
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 | 25 | #include <map>
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| [357fba] | 26 | 
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| [3738f0] | 27 | //#include "CodePatterns/Assert.hpp"
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 | 28 | //#include "CodePatterns/Log.hpp"
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 | 29 | //#include "CodePatterns/Verbose.hpp"
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| [e4fe8d] | 30 | #include "Helpers/defs.hpp"
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| [57f243] | 31 | #include "LinearAlgebra/Vector.hpp"
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| [34c43a] | 32 | #include "World.hpp"
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| [357fba] | 33 | 
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| [f66195] | 34 | /****************************************** forward declarations *****************************/
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 | 35 | 
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| [34c43a] | 36 | class IPointCloud;
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| [f66195] | 37 | class TesselPoint;
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 | 38 | 
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 | 39 | /********************************************** definitions *********************************/
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| [e1bc68] | 40 | 
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| [c66537] | 41 | //< Upper bound for number of cell nodes used in sensibility check on allocation.
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 | 42 | enum { MAX_LINKEDCELLNODES = 1000000 };
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| [6ac7ee] | 43 | 
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| [f66195] | 44 | /********************************************** declarations *******************************/
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 | 45 | 
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| [34c43a] | 46 | typedef std::list<TesselPoint *> TesselPointSTLList;
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 | 47 | 
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| [357fba] | 48 | /** Linked Cell class for containing Vectors in real space efficiently.
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 | 49 |  */
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 | 50 | class LinkedCell {
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| [734816] | 51 | private:
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 | 52 | 
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 | 53 | public:
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| [042f82] | 54 |     Vector max;       // upper boundary
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 | 55 |     Vector min;       // lower boundary
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| [34c43a] | 56 |     TesselPointSTLList *LC;  // linked cell list
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| [042f82] | 57 |     double RADIUS;    // cell edge length
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 | 58 |     int N[NDIM];      // number of cells per axis
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| [776b64] | 59 |     mutable int n[NDIM];      // temporary variable for current cell per axis
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 | 60 |     mutable int index;        // temporary index variable , access by index = n[0] * N[1] * N[2] + n[1] * N[2] + n[2];
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| [6ac7ee] | 61 | 
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| [042f82] | 62 |     LinkedCell();
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| [34c43a] | 63 |     LinkedCell(IPointCloud &set, const double radius);
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| [042f82] | 64 |     ~LinkedCell();
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| [34c43a] | 65 |     const TesselPointSTLList* GetCurrentCell()const ;
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 | 66 |     const TesselPointSTLList* GetRelativeToCurrentCell(const int relative[NDIM])const ;
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| [776b64] | 67 |     bool SetIndexToNode(const TesselPoint * const Walker)const ;
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| [d74077] | 68 |     bool SetIndexToVector(const Vector &x)const ;
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| [ffe885] | 69 |     double SetClosestIndexToOutsideVector(const Vector * const x) const;
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| [776b64] | 70 |     bool CheckBounds()const ;
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 | 71 |     bool CheckBounds(const int relative[NDIM])const ;
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| [893bea] | 72 |     void GetNeighbourBounds(int lower[NDIM], int upper[NDIM], int step = 1)const ;
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| [6ac7ee] | 73 | 
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| [34c43a] | 74 |     TesselPointSTLList* GetallNeighbours(const double distance = 0) const;
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 | 75 |     TesselPointSTLList* GetPointsInsideSphere(const double radius, const Vector * const center) const;
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| [042f82] | 76 |     // not implemented yet
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| [357fba] | 77 |     bool AddNode(Vector *Walker);
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 | 78 |     bool DeleteNode(Vector *Walker);
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 | 79 |     bool MoveNode(Vector *Walker);
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| [e1bc68] | 80 | };
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 | 81 | 
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 | 82 | #endif /*LINKEDCELL_HPP_*/
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