| [6b919f8] | 1 | /* | 
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|  | 2 | * atom_atominfo.cpp | 
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|  | 3 | * | 
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|  | 4 | *  Created on: Oct 19, 2009 | 
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|  | 5 | *      Author: heber | 
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|  | 6 | */ | 
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|  | 7 |  | 
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| [bf3817] | 8 | // include config.h | 
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|  | 9 | #ifdef HAVE_CONFIG_H | 
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|  | 10 | #include <config.h> | 
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|  | 11 | #endif | 
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|  | 12 |  | 
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| [112b09] | 13 | #include "Helpers/MemDebug.hpp" | 
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|  | 14 |  | 
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| [f16a4b] | 15 | #include "periodentafel.hpp" | 
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|  | 16 | #include "World.hpp" | 
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| [d74077] | 17 | #include "element.hpp" | 
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| [6b919f8] | 18 | #include "atom_atominfo.hpp" | 
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|  | 19 |  | 
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|  | 20 | /** Constructor of class AtomInfo. | 
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|  | 21 | */ | 
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| [97b825] | 22 | AtomInfo::AtomInfo() : | 
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|  | 23 | AtomicElement(NULL) | 
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|  | 24 | {}; | 
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| [d74077] | 25 |  | 
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|  | 26 | /** Copy constructor of class AtomInfo. | 
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|  | 27 | */ | 
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| [97b825] | 28 | AtomInfo::AtomInfo(const AtomInfo &_atom) : | 
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|  | 29 | AtomicPosition(_atom.AtomicPosition), | 
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|  | 30 | AtomicElement(_atom.AtomicElement) | 
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|  | 31 | {}; | 
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| [d74077] | 32 |  | 
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| [97b825] | 33 | AtomInfo::AtomInfo(const VectorInterface &_v) : | 
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|  | 34 | AtomicPosition(_v.getPosition()), | 
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|  | 35 | AtomicElement(NULL) | 
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| [d74077] | 36 | {}; | 
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| [6b919f8] | 37 |  | 
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|  | 38 | /** Destructor of class AtomInfo. | 
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|  | 39 | */ | 
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|  | 40 | AtomInfo::~AtomInfo() | 
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|  | 41 | { | 
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|  | 42 | }; | 
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|  | 43 |  | 
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| [d74077] | 44 | const element *AtomInfo::getType() const | 
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|  | 45 | { | 
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|  | 46 | return AtomicElement; | 
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|  | 47 | } | 
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|  | 48 |  | 
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|  | 49 | const double& AtomInfo::operator[](size_t i) const | 
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|  | 50 | { | 
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|  | 51 | return AtomicPosition[i]; | 
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|  | 52 | } | 
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|  | 53 |  | 
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|  | 54 | const double& AtomInfo::at(size_t i) const | 
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|  | 55 | { | 
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|  | 56 | return AtomicPosition.at(i); | 
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|  | 57 | } | 
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|  | 58 |  | 
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|  | 59 | void AtomInfo::set(size_t i, const double value) | 
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|  | 60 | { | 
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|  | 61 | AtomicPosition.at(i) = value; | 
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|  | 62 | } | 
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|  | 63 |  | 
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|  | 64 | const Vector& AtomInfo::getPosition() const | 
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|  | 65 | { | 
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|  | 66 | return AtomicPosition; | 
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| [f16a4b] | 67 | } | 
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|  | 68 |  | 
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| [ead4e6] | 69 | void AtomInfo::setType(const element* _type) { | 
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| [d74077] | 70 | AtomicElement = _type; | 
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| [f16a4b] | 71 | } | 
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|  | 72 |  | 
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| [d74077] | 73 | void AtomInfo::setType(const int Z) { | 
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| [ead4e6] | 74 | const element *elem = World::getInstance().getPeriode()->FindElement(Z); | 
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| [f16a4b] | 75 | setType(elem); | 
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|  | 76 | } | 
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| [d74077] | 77 |  | 
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|  | 78 | void AtomInfo::setPosition(const Vector& _vector) | 
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|  | 79 | { | 
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|  | 80 | AtomicPosition = _vector; | 
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|  | 81 | //cout << "AtomInfo::setPosition: " << getType()->symbol << " at " << getPosition() << endl; | 
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|  | 82 | } | 
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|  | 83 |  | 
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|  | 84 | const VectorInterface& AtomInfo::operator+=(const Vector& b) | 
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|  | 85 | { | 
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|  | 86 | AtomicPosition += b; | 
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|  | 87 | return *this; | 
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|  | 88 | } | 
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|  | 89 |  | 
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|  | 90 | const VectorInterface& AtomInfo::operator-=(const Vector& b) | 
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|  | 91 | { | 
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|  | 92 | AtomicPosition -= b; | 
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|  | 93 | return *this; | 
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|  | 94 | } | 
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|  | 95 |  | 
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|  | 96 | Vector const AtomInfo::operator+(const Vector& b) const | 
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|  | 97 | { | 
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|  | 98 | Vector a(AtomicPosition); | 
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|  | 99 | a += b; | 
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|  | 100 | return a; | 
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|  | 101 | } | 
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|  | 102 |  | 
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|  | 103 | Vector const AtomInfo::operator-(const Vector& b) const | 
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|  | 104 | { | 
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|  | 105 | Vector a(AtomicPosition); | 
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|  | 106 | a -= b; | 
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|  | 107 | return a; | 
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|  | 108 | } | 
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|  | 109 |  | 
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|  | 110 | double AtomInfo::distance(const Vector &point) const | 
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|  | 111 | { | 
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|  | 112 | return AtomicPosition.distance(point); | 
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|  | 113 | } | 
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|  | 114 |  | 
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|  | 115 | double AtomInfo::DistanceSquared(const Vector &y) const | 
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|  | 116 | { | 
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|  | 117 | return AtomicPosition.DistanceSquared(y); | 
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|  | 118 | } | 
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|  | 119 |  | 
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|  | 120 | double AtomInfo::distance(const VectorInterface &_atom) const | 
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|  | 121 | { | 
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|  | 122 | return _atom.distance(AtomicPosition); | 
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|  | 123 | } | 
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|  | 124 |  | 
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|  | 125 | double AtomInfo::DistanceSquared(const VectorInterface &_atom) const | 
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|  | 126 | { | 
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|  | 127 | return _atom.DistanceSquared(AtomicPosition); | 
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|  | 128 | } | 
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|  | 129 |  | 
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|  | 130 | VectorInterface &AtomInfo::operator=(const Vector& _vector) | 
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|  | 131 | { | 
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|  | 132 | AtomicPosition = _vector; | 
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|  | 133 | return *this; | 
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|  | 134 | } | 
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|  | 135 |  | 
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|  | 136 | void AtomInfo::ScaleAll(const double *factor) | 
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|  | 137 | { | 
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|  | 138 | AtomicPosition.ScaleAll(factor); | 
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|  | 139 | } | 
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|  | 140 |  | 
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|  | 141 | void AtomInfo::ScaleAll(const Vector &factor) | 
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|  | 142 | { | 
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|  | 143 | AtomicPosition.ScaleAll(factor); | 
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|  | 144 | } | 
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|  | 145 |  | 
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|  | 146 | void AtomInfo::Scale(const double factor) | 
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|  | 147 | { | 
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|  | 148 | AtomicPosition.Scale(factor); | 
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|  | 149 | } | 
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|  | 150 |  | 
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|  | 151 | void AtomInfo::Zero() | 
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|  | 152 | { | 
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|  | 153 | AtomicPosition.Zero(); | 
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|  | 154 | } | 
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|  | 155 |  | 
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|  | 156 | void AtomInfo::One(const double one) | 
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|  | 157 | { | 
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|  | 158 | AtomicPosition.One(one); | 
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|  | 159 | } | 
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|  | 160 |  | 
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|  | 161 | void AtomInfo::LinearCombinationOfVectors(const Vector &x1, const Vector &x2, const Vector &x3, const double * const factors) | 
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|  | 162 | { | 
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|  | 163 | AtomicPosition.LinearCombinationOfVectors(x1,x2,x3,factors); | 
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|  | 164 | } | 
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|  | 165 |  | 
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|  | 166 | const AtomInfo& operator*=(AtomInfo& a, const double m) | 
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|  | 167 | { | 
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|  | 168 | a.Scale(m); | 
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|  | 169 | return a; | 
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|  | 170 | } | 
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|  | 171 |  | 
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|  | 172 | AtomInfo const operator*(const AtomInfo& a, const double m) | 
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|  | 173 | { | 
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|  | 174 | AtomInfo copy(a); | 
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|  | 175 | copy *= m; | 
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|  | 176 | return copy; | 
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|  | 177 | } | 
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|  | 178 |  | 
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|  | 179 | AtomInfo const operator*(const double m, const AtomInfo& a) | 
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|  | 180 | { | 
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|  | 181 | AtomInfo copy(a); | 
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|  | 182 | copy *= m; | 
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|  | 183 | return copy; | 
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|  | 184 | } | 
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|  | 185 |  | 
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|  | 186 | std::ostream & AtomInfo::operator << (std::ostream &ost) const | 
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|  | 187 | { | 
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|  | 188 | return (ost << getPosition()); | 
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|  | 189 | } | 
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|  | 190 |  | 
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|  | 191 | std::ostream & operator << (std::ostream &ost, const AtomInfo &a) | 
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|  | 192 | { | 
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|  | 193 | ost << a; | 
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|  | 194 | return ost; | 
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|  | 195 | } | 
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|  | 196 |  | 
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