| 1 | /*
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| 2 |  * Project: MoleCuilder
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| 3 |  * Description: creates and alters molecular systems
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| 4 |  * Copyright (C)  2015 Frederik Heber. All rights reserved.
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| 5 |  *
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| 6 |  *
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| 7 |  *   This file is part of MoleCuilder.
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| 8 |  *
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| 9 |  *    MoleCuilder is free software: you can redistribute it and/or modify
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| 10 |  *    it under the terms of the GNU General Public License as published by
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| 11 |  *    the Free Software Foundation, either version 2 of the License, or
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| 12 |  *    (at your option) any later version.
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| 13 |  *
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| 14 |  *    MoleCuilder is distributed in the hope that it will be useful,
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| 15 |  *    but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 16 |  *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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| 17 |  *    GNU General Public License for more details.
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| 18 |  *
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| 19 |  *    You should have received a copy of the GNU General Public License
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| 20 |  *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>.
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| 21 |  */
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| 22 | 
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| 23 | /*
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| 24 |  * QtObservedInstanceBoard.cpp
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| 25 |  *
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| 26 |  *  Created on: Oct 17, 2015
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| 27 |  *      Author: heber
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| 28 |  */
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| 29 | 
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| 30 | 
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| 31 | // include config.h
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| 32 | #ifdef HAVE_CONFIG_H
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| 33 | #include <config.h>
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| 34 | #endif
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| 35 | 
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| 36 | #include "QtObservedInstanceBoard.hpp"
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| 37 | 
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| 38 | #include <QtCore/QMetaType>
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| 39 | 
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| 40 | #include "UIElements/Qt4/InstanceBoard/QtObservedAtom.hpp"
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| 41 | #include "UIElements/Qt4/InstanceBoard/QtObservedMolecule.hpp"
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| 42 | 
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| 43 | //#include "CodePatterns/MemDebug.hpp"
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| 44 | 
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| 45 | #include <boost/bind.hpp>
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| 46 | 
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| 47 | #include "CodePatterns/Log.hpp"
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| 48 | 
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| 49 | #include "Atom/atom.hpp"
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| 50 | #include "Descriptors/AtomIdDescriptor.hpp"
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| 51 | #include "Descriptors/MoleculeIdDescriptor.hpp"
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| 52 | #include "molecule.hpp"
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| 53 | #include "UIElements/Qt4/InstanceBoard/ObservedValuesContainer_impl.hpp"
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| 54 | #include "World.hpp"
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| 55 | 
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| 56 | QtObservedInstanceBoard::QtObservedInstanceBoard(QWidget * _parent) :
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| 57 |   QWidget(_parent),
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| 58 |   Observer("QtObservedInstanceBoard"),
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| 59 |   WorldSignedOn(false),
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| 60 |   atomObservedValues(
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| 61 |       "atom",
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| 62 |       *this,
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| 63 |       boost::bind(&QtObservedInstanceBoard::atomcountsubjectKilled, this, _1)),
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| 64 |   bondObservedValues(
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| 65 |       "bond",
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| 66 |       *this,
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| 67 |       boost::bind(&QtObservedInstanceBoard::bondcountsubjectKilled, this, _1)),
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| 68 |   moleculeObservedValues(
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| 69 |       "molecule",
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| 70 |       *this,
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| 71 |       boost::bind(&QtObservedInstanceBoard::moleculecountsubjectKilled, this, _1))
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| 72 | {
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| 73 |   qRegisterMetaType<ObservedValue_Index_t>("ObservedValue_Index_t");
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| 74 |   qRegisterMetaType<QtObservedAtom::ptr>("QtObservedAtom::ptr");
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| 75 |   qRegisterMetaType<QtObservedBond::ptr>("QtObservedBond::ptr");
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| 76 |   qRegisterMetaType<QtObservedMolecule::ptr>("QtObservedMolecule::ptr");
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| 77 | 
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| 78 |   // be first (besides ObservedValues to know about new insertions)
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| 79 |   World::getInstance().signOn(this, World::AtomInserted, GlobalObservableInfo::PriorityLevel(int(-10)));
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| 80 |   World::getInstance().signOn(this, World::MoleculeInserted, GlobalObservableInfo::PriorityLevel(int(-10)));
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| 81 |   WorldSignedOn = true;
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| 82 | }
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| 83 | 
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| 84 | QtObservedInstanceBoard::~QtObservedInstanceBoard()
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| 85 | {
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| 86 |   if (WorldSignedOn) {
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| 87 |     World::getInstance().signOff(this, World::AtomInserted);
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| 88 |     World::getInstance().signOff(this, World::MoleculeInserted);
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| 89 |   }
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| 90 |   // sign off from all remaining molecules, bonds, and atoms
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| 91 |   for (SignedOn_t::iterator iter = AtomSignedOn.begin(); !AtomSignedOn.empty();
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| 92 |       iter = AtomSignedOn.begin()) {
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| 93 |     (*iter)->signOff(this, atom::IndexChanged);
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| 94 |     (*iter)->signOff(this, atom::BondsAdded);
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| 95 |     AtomSignedOn.erase(*iter);
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| 96 |   }
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| 97 | 
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| 98 |   for (SignedOn_t::iterator iter = MoleculeSignedOn.begin(); !MoleculeSignedOn.empty();
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| 99 |       iter = MoleculeSignedOn.begin()) {
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| 100 |     (*iter)->signOff(this, molecule::IndexChanged);
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| 101 |     MoleculeSignedOn.erase(iter);
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| 102 |   }
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| 103 | }
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| 104 | 
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| 105 | void QtObservedInstanceBoard::update(Observable *publisher)
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| 106 | {
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| 107 |   ASSERT(0,
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| 108 |       "QtObservedInstanceBoard::update() - we are not signed on to general updates.");
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| 109 | }
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| 110 | 
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| 111 | void QtObservedInstanceBoard::subjectKilled(Observable *publisher)
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| 112 | {
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| 113 |   SignedOn_t::iterator iter = AtomSignedOn.find(publisher);
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| 114 |   if ( iter != AtomSignedOn.end()) {
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| 115 |     LOG(3, "DEBUG: InstanceBoard got subjectKilled() from atom " << publisher);
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| 116 |     AtomSignedOn.erase(iter); // only remove one
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| 117 |   } else {
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| 118 |     iter = MoleculeSignedOn.find(publisher);
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| 119 |     if ( iter != MoleculeSignedOn.end()) {
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| 120 |       LOG(3, "DEBUG: InstanceBoard got subjectKilled() from molecule " << publisher);
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| 121 |       MoleculeSignedOn.erase(iter);
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| 122 |     } else {
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| 123 |       ASSERT(0,
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| 124 |           "QtObservedInstanceBoard::subjectKilled() - could not find signedOn for atom/molecule "+toString(publisher));
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| 125 |     }
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| 126 |   }
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| 127 | }
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| 128 | 
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| 129 | void QtObservedInstanceBoard::recieveNotification(Observable *publisher, Notification_ptr notification)
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| 130 | {
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| 131 |   if (static_cast<World *>(publisher) == World::getPointer()) {
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| 132 |     switch (notification->getChannelNo()) {
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| 133 |       case World::MoleculeInserted:
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| 134 |       {
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| 135 |         const moleculeId_t _id = const_cast<const World &>(World::getInstance()).lastChangedMolId();
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| 136 |   #ifdef LOG_OBSERVER
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| 137 |         observerLog().addMessage() << "++ Observer " << observerLog().getName(static_cast<Observer *>(this)) << " received notification that molecule "+toString(_id)+" has been inserted.";
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| 138 |   #endif
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| 139 |         LOG(3, "DEBUG: InformationBoard got moleculeInserted signal for molecule " << _id);
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| 140 |         const molecule * const _molecule = const_cast<const World &>(World::getInstance()).
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| 141 |             getMolecule(MoleculeById(_id));
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| 142 |         if (_molecule != NULL) {
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| 143 |           LOG(3, "DEBUG: InformationBoard initializes QtObservedMolecule for " << _id);
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| 144 |           QtObservedMolecule::ptr observedmolecule(
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| 145 |               new QtObservedMolecule(
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| 146 |                   _id,
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| 147 |                   _molecule,
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| 148 |                   *this));
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| 149 |           observedmolecule->setSelfRef(observedmolecule);
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| 150 |           const ObservedValue_Index_t index = observedmolecule->getIndex();
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| 151 |           moleculeObservedValues.insert(index, observedmolecule);
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| 152 |           moleculeids_lookup.left.insert( std::make_pair(_id, index) );
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| 153 |           // we need to check for index changes
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| 154 |           LOG(3, "DEBUG: InformationBoard signOn()s to molecule " << _id);
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| 155 |           _molecule->signOn(this, molecule::IndexChanged);
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| 156 |           MoleculeSignedOn.insert( static_cast<Observable *>(const_cast<molecule *>(_molecule)) );
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| 157 | 
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| 158 |           emit moleculeInserted(observedmolecule);
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| 159 |         } else {
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| 160 |           ELOG(1, "QtObservedInstanceBoard got MoleculeInserted for unknown molecule id " << _id);
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| 161 |         }
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| 162 |         break;
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| 163 |       }
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| 164 |       case World::AtomInserted:
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| 165 |       {
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| 166 |         const atomId_t _id = const_cast<const World &>(World::getInstance()).lastChangedAtomId();
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| 167 |   #ifdef LOG_OBSERVER
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| 168 |         observerLog().addMessage() << "++ Observer " << observerLog().getName(static_cast<Observer *>(this)) << " received notification that atom "+toString(_id)+" has been inserted.";
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| 169 |   #endif
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| 170 |         LOG(3, "DEBUG: InformationBoard got atomInserted signal for atom " << _id);
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| 171 |         const atom * const _atom = const_cast<const World &>(World::getInstance()).
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| 172 |             getAtom(AtomById(_id));
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| 173 |         if (_atom!= NULL) {
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| 174 |           LOG(3, "DEBUG: InformationBoard initializes QtObservedAtom for " << _id);
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| 175 |           QtObservedAtom::ptr observedatom(
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| 176 |               new QtObservedAtom(_id, _atom, *this));
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| 177 |           observedatom->setSelfRef(observedatom);
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| 178 |           const ObservedValue_Index_t index = observedatom->getIndex();
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| 179 |           atomObservedValues.insert(index, observedatom);
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| 180 |           atomids_lookup.left.insert( std::make_pair(_id, index) );
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| 181 |           // we need to check for index changes
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| 182 |           LOG(3, "DEBUG: InformationBoard signOn()s to atom " << _id);
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| 183 |           _atom->signOn(this, atom::IndexChanged);
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| 184 |           _atom->signOn(this, atom::BondsAdded);
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| 185 |           AtomSignedOn.insert( static_cast<Observable *>(const_cast<atom *>(_atom)) );
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| 186 |           AtomSignedOn.insert( static_cast<Observable *>(const_cast<atom *>(_atom)) );
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| 187 |           emit atomInserted(observedatom);
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| 188 |         } else {
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| 189 |           ELOG(1, "QtObservedInstanceBoard got AtomInserted for unknown atom id " << _id);
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| 190 |         }
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| 191 |         break;
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| 192 |       }
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| 193 |       default:
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| 194 |         ASSERT(0, "QtObservedInstanceBoard::recieveNotification() - we cannot get here for World.");
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| 195 |         break;
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| 196 |     }
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| 197 |   } else if (dynamic_cast<molecule *>(publisher) != NULL) {
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| 198 |     const moleculeId_t molid = const_cast<const World &>(World::getInstance()).lastChangedMolId();
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| 199 |     switch (notification->getChannelNo()) {
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| 200 |       case molecule::IndexChanged:
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| 201 |       {
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| 202 |         // molecule has changed its index
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| 203 |         const moleculeId_t newmoleculeId = dynamic_cast<molecule *>(publisher)->getId();
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| 204 |         LOG(3, "DEBUG: InformationBoard got IndexChanged from molecule " << molid << " to " << newmoleculeId);
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| 205 |         {
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| 206 |           typename IdtoIndex_t<moleculeId_t>::left_iterator iter = moleculeids_lookup.left.find(molid);
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| 207 |           ASSERT( iter != moleculeids_lookup.left.end(),
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| 208 |               "QtObservedInstanceBoard::recieveNotification() - mol id "
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| 209 |               +toString(molid)+" unknown to lookup.");
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| 210 |           const ObservedValue_Index_t index = iter->second;
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| 211 |           moleculeids_lookup.left.erase(iter);
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| 212 |           moleculeids_lookup.left.insert( std::pair<moleculeId_t, ObservedValue_Index_t>(newmoleculeId, index) );
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| 213 |         }
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| 214 |         // no need update SignedOn, ref does not change
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| 215 |         emit moleculeIndexChanged(molid, newmoleculeId);
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| 216 |         break;
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| 217 |       }
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| 218 |       default:
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| 219 |         ASSERT(0, "QtObservedInstanceBoard::recieveNotification() - we cannot get here.");
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| 220 |         break;
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| 221 |     }
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| 222 |   } else if (dynamic_cast<atom *>(publisher) != NULL) {
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| 223 |     const atomId_t oldatomId = const_cast<const World &>(World::getInstance()).lastChangedAtomId();
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| 224 |     switch (notification->getChannelNo()) {
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| 225 |       case AtomObservable::IndexChanged:
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| 226 |       {
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| 227 |         const atomId_t newatomId = dynamic_cast<atom *>(publisher)->getId();
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| 228 |         LOG(3, "DEBUG: InformationBoard got IndexChanged from atom " << oldatomId << " to " << newatomId);
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| 229 |         {
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| 230 |           typename IdtoIndex_t<atomId_t>::left_iterator iter = atomids_lookup.left.find(oldatomId);
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| 231 |           ASSERT( iter != atomids_lookup.left.end(),
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| 232 |               "QtObservedInstanceBoard::recieveNotification() - atom id "
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| 233 |               +toString(oldatomId)+" unknown to lookup.");
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| 234 |           const ObservedValue_Index_t index = iter->second;
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| 235 |           atomids_lookup.left.erase(iter);
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| 236 |           atomids_lookup.left.insert( std::pair<atomId_t, ObservedValue_Index_t>(newatomId, index) );
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| 237 |         }
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| 238 |         // no need update SignedOn, ref does not change
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| 239 |         emit atomIndexChanged(oldatomId, newatomId);
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| 240 |         break;
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| 241 |       }
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| 242 |       case AtomObservable::BondsAdded:
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| 243 |       {
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| 244 |         const atom * _atom = dynamic_cast<atom *>(publisher);
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| 245 |         const atomId_t _id = _atom->getId();
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| 246 | #ifdef LOG_OBSERVER
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| 247 |       observerLog().addMessage() << "++ Observer " << observerLog().getName(static_cast<Observer *>(this)) << " received notification that atom "+toString(_id)+" has been inserted.";
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| 248 | #endif
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| 249 |         LOG(3, "DEBUG: InformationBoard got bondInserted signal for atom " << _id);
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| 250 |         if (_atom != NULL) {
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| 251 |           // find the new bond by simply taking the last added to the list
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| 252 |           const BondList &ListOfBonds = _atom->getListOfBonds();
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| 253 |           const bond::ptr bondref = ListOfBonds.back();
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| 254 | 
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| 255 |           // check whether bond is already present, cause we get BondsAdded from both atoms
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| 256 |           const bondId_t bondid =
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| 257 |               std::make_pair( bondref->leftatom->getId(), bondref->rightatom->getId());
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| 258 |           if (!bondids_lookup.left.count(bondid)) {
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| 259 |             const QtObservedAtom::ptr leftatom = getObservedAtom(bondref->leftatom->getId());
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| 260 |             ASSERT( leftatom,
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| 261 |                 "QtObservedInstanceBoard::recieveNotification() - QtObservedAtom leftatom to bond must exist.");
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| 262 |             const QtObservedAtom::ptr rightatom = getObservedAtom(bondref->rightatom->getId());
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| 263 |             ASSERT( rightatom,
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| 264 |                 "QtObservedInstanceBoard::recieveNotification() - QtObservedAtom leftatom to bond must exist.");
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| 265 |             LOG(3, "DEBUG: InformationBoard initializes QtObservedBond for " << bondid);
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| 266 |             QtObservedBond::ptr observedbond(
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| 267 |                 new QtObservedBond(bondid, bondref, leftatom, rightatom, *this));
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| 268 |             const ObservedValue_Index_t index = observedbond->getIndex();
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| 269 |             bondObservedValues.insert(index, observedbond);
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| 270 |             bondids_lookup.left.insert( std::make_pair(bondid, index) );
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| 271 |             emit bondInserted(observedbond);
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| 272 |           }
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| 273 |         } else {
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| 274 |           ELOG(1, "QtObservedInstanceBoard got BondsAdded for unknown atom id " << _id);
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| 275 |         }
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| 276 |         break;
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| 277 |       }
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| 278 |       default:
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| 279 |         ASSERT(0, "QtObservedInstanceBoard::recieveNotification() - we cannot get here.");
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| 280 |         break;
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| 281 |     }
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| 282 |   } else {
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| 283 |     ASSERT(0, "QtObservedInstanceBoard::recieveNotification() - notification from unknown source.");
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| 284 |   }
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| 285 | }
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| 286 | 
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| 287 | const atomId_t QtObservedInstanceBoard::getAtomIdToIndex(ObservedValue_Index_t _id) const
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| 288 | {
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| 289 |   typename IdtoIndex_t<atomId_t>::right_const_iterator iter = atomids_lookup.right.find(_id);
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| 290 |   if (iter != atomids_lookup.right.end())
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| 291 |     return iter->second;
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| 292 |   else
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| 293 |     return (atomId_t)-1;
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| 294 | }
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| 295 | 
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| 296 | const QtObservedInstanceBoard::bondId_t
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| 297 | QtObservedInstanceBoard::getBondIdToIndex(ObservedValue_Index_t _id) const
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| 298 | {
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| 299 |   typename IdtoIndex_t<bondId_t>::right_const_iterator iter = bondids_lookup.right.find(_id);
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| 300 |   if (iter != bondids_lookup.right.end())
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| 301 |     return iter->second;
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| 302 |   else
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| 303 |     return QtObservedInstanceBoard::bondId_t(std::make_pair( (atomId_t)-1, (atomId_t)-1) );
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| 304 | }
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| 305 | 
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| 306 | const moleculeId_t QtObservedInstanceBoard::getMoleculeIdToIndex(ObservedValue_Index_t _id) const
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| 307 | {
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| 308 |   typename IdtoIndex_t<moleculeId_t>::right_const_iterator iter = moleculeids_lookup.right.find(_id);
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| 309 |   if (iter != moleculeids_lookup.right.end())
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| 310 |     return iter->second;
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| 311 |   else
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| 312 |     return (moleculeId_t)-1;
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| 313 | }
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| 314 | 
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| 315 | void QtObservedInstanceBoard::atomcountsubjectKilled(ObservedValue_Index_t _id)
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| 316 | {
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| 317 |   LOG(3, "DEBUG: InstanceBoard emits atomRemoved for " << getAtomIdToIndex(_id));
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| 318 |   emit atomRemoved(_id);
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| 319 | }
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| 320 | 
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| 321 | void QtObservedInstanceBoard::bondcountsubjectKilled(ObservedValue_Index_t _id)
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| 322 | {
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| 323 |   LOG(3, "DEBUG: InstanceBoard emits bondRemoved for " << getBondIdToIndex(_id));
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| 324 |   emit bondRemoved(_id);
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| 325 | }
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| 326 | 
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| 327 | void QtObservedInstanceBoard::moleculecountsubjectKilled(ObservedValue_Index_t _id)
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| 328 | {
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| 329 |   LOG(3, "DEBUG: InstanceBoard emits moleculeRemoved for " << getMoleculeIdToIndex(_id));
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| 330 |   emit moleculeRemoved(_id);
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| 331 | }
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| 332 | 
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| 333 | QtObservedAtom::ptr QtObservedInstanceBoard::getObservedAtom(const atomId_t _id)
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| 334 | {
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| 335 |   typename IdtoIndex_t<atomId_t>::left_iterator iter = atomids_lookup.left.find(_id);
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| 336 |   if (iter == atomids_lookup.left.end())
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| 337 |     return QtObservedAtom::ptr();
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| 338 |   else
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| 339 |     return atomObservedValues.get(iter->second);
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| 340 | }
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| 341 | 
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| 342 | QtObservedAtom::ptr QtObservedInstanceBoard::getObservedAtom(ObservedValue_Index_t _id)
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| 343 | {
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| 344 |   return atomObservedValues.get(_id);
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| 345 | }
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| 346 | 
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| 347 | QtObservedBond::ptr QtObservedInstanceBoard::getObservedBond(const bondId_t _id)
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| 348 | {
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| 349 |   typename IdtoIndex_t<bondId_t>::left_iterator iter = bondids_lookup.left.find(_id);
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| 350 |   if (iter == bondids_lookup.left.end())
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| 351 |     return QtObservedBond::ptr();
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| 352 |   else
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| 353 |     return bondObservedValues.get(iter->second);
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| 354 | }
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| 355 | 
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| 356 | QtObservedBond::ptr QtObservedInstanceBoard::getObservedBond(ObservedValue_Index_t _id)
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| 357 | {
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| 358 |   return bondObservedValues.get(_id);
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| 359 | }
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| 360 | 
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| 361 | QtObservedMolecule::ptr QtObservedInstanceBoard::getObservedMolecule(const moleculeId_t _id)
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| 362 | {
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| 363 |   typename IdtoIndex_t<moleculeId_t>::left_iterator iter = moleculeids_lookup.left.find(_id);
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| 364 |   if (iter == moleculeids_lookup.left.end())
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| 365 |     return QtObservedMolecule::ptr();
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| 366 |   else
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| 367 |     return moleculeObservedValues.get(iter->second);
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| 368 | }
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| 369 | 
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| 370 | QtObservedMolecule::ptr QtObservedInstanceBoard::getObservedMolecule(ObservedValue_Index_t _id)
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| 371 | {
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| 372 |   return moleculeObservedValues.get(_id);
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| 373 | }
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| 374 | 
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| 375 | void QtObservedInstanceBoard::markObservedAtomAsConnected(ObservedValue_Index_t _id)
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| 376 | {
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| 377 |   atomObservedValues.markObservedValuesAsConnected(_id);
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| 378 | }
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| 379 | 
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| 380 | void QtObservedInstanceBoard::markObservedAtomAsDisconnected(ObservedValue_Index_t _id)
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| 381 | {
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| 382 |   atomObservedValues.markObservedValuesAsDisconnected(_id);
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| 383 | }
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| 384 | 
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| 385 | void QtObservedInstanceBoard::markObservedAtomForErase(ObservedValue_Index_t _id)
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| 386 | {
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| 387 |   atomObservedValues.eraseObservedValues(_id);
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| 388 |   atomids_lookup.right.erase(_id);
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| 389 | }
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| 390 | 
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| 391 | void QtObservedInstanceBoard::markObservedBondAsConnected(ObservedValue_Index_t _id)
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| 392 | {
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| 393 |   bondObservedValues.markObservedValuesAsConnected(_id);
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| 394 | }
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| 395 | 
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| 396 | void QtObservedInstanceBoard::markObservedBondAsDisconnected(ObservedValue_Index_t _id)
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| 397 | {
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| 398 |   bondObservedValues.markObservedValuesAsDisconnected(_id);
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| 399 | }
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| 400 | 
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| 401 | void QtObservedInstanceBoard::markObservedBondForErase(ObservedValue_Index_t _id)
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| 402 | {
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| 403 |   bondObservedValues.eraseObservedValues(_id);
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| 404 |   bondids_lookup.right.erase(_id);
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| 405 | }
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| 406 | 
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| 407 | void QtObservedInstanceBoard::markObservedMoleculeAsConnected(ObservedValue_Index_t _id)
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| 408 | {
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| 409 |   moleculeObservedValues.markObservedValuesAsConnected(_id);
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| 410 | }
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| 411 | 
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| 412 | void QtObservedInstanceBoard::markObservedMoleculeAsDisconnected(ObservedValue_Index_t _id)
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| 413 | {
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| 414 |   moleculeObservedValues.markObservedValuesAsDisconnected(_id);
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| 415 | }
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| 416 | 
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| 417 | void QtObservedInstanceBoard::markObservedMoleculeForErase(ObservedValue_Index_t _id)
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| 418 | {
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| 419 |   moleculeObservedValues.eraseObservedValues(_id);
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| 420 |   moleculeids_lookup.right.erase(_id);
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| 421 | }
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