source: src/Potentials/BindingModel.cpp@ bcc29ca

Candidate_v1.7.0 stable
Last change on this file since bcc29ca was c98620, checked in by Frederik Heber <frederik.heber@…>, 4 years ago

FIX: StreamFactory did not set BindingModel.

  • we streamed into a default potential instance but this does not set the BindingModel. Now, we use the particle types from that deseralized instance and instantiate a new potential that then also generates the BindingModel.
  • added output operator to BindingModel.
  • TEST: This fixes the fit-compound-potential regression test case.
  • Property mode set to 100644
File size: 2.5 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2016 Frederik Heber. All rights reserved.
5 *
6 *
7 * This file is part of MoleCuilder.
8 *
9 * MoleCuilder is free software: you can redistribute it and/or modify
10 * it under the terms of the GNU General Public License as published by
11 * the Free Software Foundation, either version 2 of the License, or
12 * (at your option) any later version.
13 *
14 * MoleCuilder is distributed in the hope that it will be useful,
15 * but WITHOUT ANY WARRANTY; without even the implied warranty of
16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
17 * GNU General Public License for more details.
18 *
19 * You should have received a copy of the GNU General Public License
20 * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
21 */
22
23/*
24 * BindingModel.cpp
25 *
26 * Created on: Oct 5, 2016
27 * Author: heber
28 */
29
30
31// include config.h
32#ifdef HAVE_CONFIG_H
33#include <config.h>
34#endif
35
36//#include "CodePatterns/MemDebug.hpp"
37
38#include "Potentials/BindingModel.hpp"
39
40#include <iostream>
41
42#include "CodePatterns/toString.hpp"
43
44static HomologyGraph::nodes_t getMapOfNodes(const BindingModel::vector_nodes_t &_nodes)
45{
46 HomologyGraph::nodes_t returnnodes;
47 for (BindingModel::vector_nodes_t::const_iterator iter = _nodes.begin();
48 iter != _nodes.end(); ++iter) {
49 std::pair<HomologyGraph::nodes_t::iterator, bool > inserter;
50 inserter = returnnodes.insert( std::make_pair(*iter, 1) );
51 if (!inserter.second)
52 ++(inserter.first->second);
53 }
54 return returnnodes;
55}
56
57BindingModel::BindingModel(
58 const BindingModel::vector_nodes_t &_nodes,
59 const HomologyGraph::edges_t &_edges) :
60 graph(getMapOfNodes(_nodes), _edges),
61 nodes(_nodes)
62{}
63
64bool BindingModel::operator<(const BindingModel &model) const {
65 if (graph.getEdges().empty()) {
66 return nodes < model.nodes;
67 } else
68 return graph.getEdges() < model.graph.getEdges();
69}
70
71bool BindingModel::operator>(const BindingModel &model) const {
72 if (graph.getEdges().empty()) {
73 return nodes > model.nodes;
74 } else
75 return graph.getEdges() > model.graph.getEdges();
76}
77
78bool BindingModel::operator==(const BindingModel &model) const {
79 if (graph.getEdges().empty()) {
80 return nodes == model.nodes;
81 } else
82 return graph.getEdges() == model.graph.getEdges();
83}
84
85std::ostream& operator<<(std::ostream& ost, const BindingModel &model) {
86 model.getGraph().printEdges(ost);
87 ost << ", " << model.getNodes();
88 return ost;
89}
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