| [ee50c1] | 1 | /* | 
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|  | 2 | * Project: MoleCuilder | 
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|  | 3 | * Description: creates and alters molecular systems | 
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| [0aa122] | 4 | * Copyright (C)  2010-2012 University of Bonn. All rights reserved. | 
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| [94d5ac6] | 5 | * | 
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|  | 6 | * | 
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|  | 7 | *   This file is part of MoleCuilder. | 
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|  | 8 | * | 
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|  | 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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|  | 10 | *    it under the terms of the GNU General Public License as published by | 
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|  | 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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|  | 12 | *    (at your option) any later version. | 
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|  | 13 | * | 
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|  | 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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|  | 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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|  | 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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|  | 17 | *    GNU General Public License for more details. | 
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|  | 18 | * | 
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|  | 19 | *    You should have received a copy of the GNU General Public License | 
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|  | 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| [ee50c1] | 21 | */ | 
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|  | 22 |  | 
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|  | 23 | /* | 
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|  | 24 | * FormatParser_Parameters.cpp | 
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|  | 25 | * | 
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|  | 26 | *  Created on: Sep 30, 2011 | 
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|  | 27 | *      Author: heber | 
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|  | 28 | */ | 
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|  | 29 |  | 
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|  | 30 | // include config.h | 
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|  | 31 | #ifdef HAVE_CONFIG_H | 
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|  | 32 | #include <config.h> | 
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|  | 33 | #endif | 
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|  | 34 |  | 
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| [9eb71b3] | 35 | //#include "CodePatterns/MemDebug.hpp" | 
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| [ee50c1] | 36 |  | 
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| [7f570c] | 37 | #include <iostream> | 
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|  | 38 | #include <boost/algorithm/string.hpp> | 
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|  | 39 | #include <boost/tokenizer.hpp> | 
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|  | 40 | #include <sstream> | 
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| [ee50c1] | 41 | #include <string> | 
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|  | 42 |  | 
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| [7f570c] | 43 | #include "CodePatterns/Assert.hpp" | 
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|  | 44 | #include "CodePatterns/Log.hpp" | 
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|  | 45 |  | 
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| [6440c6] | 46 | #include "Parameters/ParameterInterface.hpp" | 
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| [ee50c1] | 47 | #include "FormatParser_Parameters.hpp" | 
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|  | 48 |  | 
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|  | 49 | /** Constructor of class FormatParser_Parameters. | 
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|  | 50 | * | 
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|  | 51 | * \note we make sure that storage is always present | 
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|  | 52 | * | 
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|  | 53 | */ | 
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|  | 54 | FormatParser_Parameters::FormatParser_Parameters() : | 
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|  | 55 | storage(new ParameterStorage) | 
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|  | 56 | {} | 
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|  | 57 |  | 
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|  | 58 | /** Copy constructor of class FormatParser_Parameters. | 
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|  | 59 | * | 
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|  | 60 | * @param _parameters instance to copy from | 
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|  | 61 | */ | 
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|  | 62 | FormatParser_Parameters::FormatParser_Parameters(const FormatParser_Parameters &_parameters) : | 
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|  | 63 | storage(new ParameterStorage(*_parameters.storage)) | 
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|  | 64 | {} | 
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|  | 65 |  | 
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|  | 66 |  | 
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|  | 67 | /** Destructor of class FormatParser_Parameters. | 
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|  | 68 | * | 
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|  | 69 | */ | 
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|  | 70 | FormatParser_Parameters::~FormatParser_Parameters() | 
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|  | 71 | { | 
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|  | 72 | delete storage; | 
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|  | 73 | } | 
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|  | 74 |  | 
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|  | 75 | /** Implements the Parameter::clone() function. | 
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|  | 76 | * | 
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|  | 77 | * @return another instance with an identical copy of each parameter in \a storage | 
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|  | 78 | */ | 
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|  | 79 | FormatParser_Parameters* FormatParser_Parameters::clone() const | 
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|  | 80 | { | 
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|  | 81 | return (new FormatParser_Parameters(*this)); | 
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|  | 82 | } | 
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|  | 83 |  | 
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|  | 84 | /** This makes this instance a clone of \a _instance. | 
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|  | 85 | * | 
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|  | 86 | * \note This is basically the other way round to clone(). | 
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|  | 87 | * | 
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|  | 88 | * @param _instance instance to clone from | 
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|  | 89 | */ | 
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|  | 90 | void FormatParser_Parameters::makeClone(const FormatParser_Parameters &_instance) | 
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|  | 91 | { | 
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|  | 92 | // we simply remove storage | 
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|  | 93 | delete storage; | 
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|  | 94 | // and clone the one from _instance | 
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|  | 95 | storage = new ParameterStorage(*_instance.storage); | 
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|  | 96 | } | 
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|  | 97 |  | 
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|  | 98 | /** Adds a parameter to \a storage. | 
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|  | 99 | * | 
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|  | 100 | * This just eases use, saves some typing and is more clear as to what is done. | 
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|  | 101 | * | 
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|  | 102 | * @param instance parameter to add | 
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|  | 103 | */ | 
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| [6440c6] | 104 | void FormatParser_Parameters::appendParameter(ParameterInterface *instance) | 
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| [ee50c1] | 105 | { | 
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|  | 106 | storage->registerInstance(instance); | 
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|  | 107 | } | 
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|  | 108 |  | 
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|  | 109 | /** Checks for presence of a parameter in \a storage. | 
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|  | 110 | * | 
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|  | 111 | * This just eases use, saves some typing and is more clear as to what is done. | 
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|  | 112 | * | 
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|  | 113 | * @return true - parameter by this \a _name is present in storage, false - else | 
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|  | 114 | */ | 
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|  | 115 | bool FormatParser_Parameters::haveParameter(const std::string &_name) const | 
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|  | 116 | { | 
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|  | 117 | return storage->isPresentByName(_name); | 
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|  | 118 | } | 
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|  | 119 |  | 
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|  | 120 | /** Gets a parameter from \a storage. | 
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|  | 121 | * | 
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|  | 122 | * This just eases use, saves some typing and is more clear as to what is done. | 
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|  | 123 | * | 
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|  | 124 | * @return pointer to instance with this \a _name | 
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|  | 125 | */ | 
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| [6440c6] | 126 | ParameterInterface *FormatParser_Parameters::getParameter(const std::string &_name) const | 
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| [ee50c1] | 127 | { | 
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|  | 128 | return storage->getByName(_name); | 
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|  | 129 | } | 
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| [7f570c] | 130 |  | 
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|  | 131 | /** Output operator for the contents of FormatParser_Parameters::params. | 
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|  | 132 | * | 
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|  | 133 | * @param ost output stream | 
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|  | 134 | * @param params reference to FormatParser_Parameters containing params. | 
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|  | 135 | * @return reference to output stream for concatenation | 
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|  | 136 | */ | 
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|  | 137 | std::ostream & operator << (std::ostream& ost, const FormatParser_Parameters ¶ms) | 
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|  | 138 | { | 
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|  | 139 | // this is ugly, but with boost::any to safeguard const-ness is plain impossible | 
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|  | 140 | std::ostringstream output; | 
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|  | 141 | ASSERT(params.storage != NULL, | 
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|  | 142 | "operator<<(FormatParser_Parameters) - storage is NULL."); | 
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|  | 143 | for (ParameterStorage::const_iterator iter = params.storage->getBeginIter(); | 
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|  | 144 | iter != params.storage->getEndIter(); | 
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|  | 145 | ++iter) | 
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| [118f1e] | 146 | if (!iter->second->getAsString().empty()) | 
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|  | 147 | output << iter->first <<  "=" << iter->second->getAsString() << ";"; | 
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| [7f570c] | 148 | ost << output.str(); | 
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|  | 149 | return ost; | 
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|  | 150 | } | 
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|  | 151 |  | 
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|  | 152 | /** Input operator for a list of parameters to place into \a params. | 
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|  | 153 | * | 
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|  | 154 | * @param ist input stream | 
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|  | 155 | * @param params parameters to parse into | 
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|  | 156 | * @return input stream for concatenation | 
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|  | 157 | */ | 
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|  | 158 | std::istream & operator >> (std::istream& ist, FormatParser_Parameters ¶ms) | 
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|  | 159 | { | 
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|  | 160 | typedef boost::tokenizer<boost::char_separator<char> > | 
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|  | 161 | tokenizer; | 
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|  | 162 | boost::char_separator<char> semicolonsep(";"); | 
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|  | 163 | boost::char_separator<char> equalitysep("="); | 
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|  | 164 | boost::char_separator<char> ticksep("\""); | 
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|  | 165 | std::string line; | 
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|  | 166 | std::getline( ist, line ); | 
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| [47d041] | 167 | //LOG(0, "INFO: full line of parameters is '" << line << "'"); | 
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| [7f570c] | 168 | tokenizer tokens(line, semicolonsep); | 
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|  | 169 | ASSERT(tokens.begin() != tokens.end(), | 
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|  | 170 | "operator<< on FormatParser_Parameters - empty string, need at least ';' in line "+line+"!"); | 
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|  | 171 | for (tokenizer::iterator tok_iter = tokens.begin(); | 
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|  | 172 | tok_iter != tokens.end(); ++tok_iter) { | 
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|  | 173 | //LOG(2, "INFO: (key,value) pair is: " << *tok_iter << "."); | 
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|  | 174 | tokenizer paramtokens(*tok_iter, equalitysep); | 
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|  | 175 | if (paramtokens.begin() != paramtokens.end()) { | 
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|  | 176 | tokenizer::iterator tok_paramiter = paramtokens.begin(); | 
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|  | 177 | ASSERT(tok_paramiter != paramtokens.end(), | 
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|  | 178 | "operator<< on FormatParser_Parameters - missing value before ' =' in token "+*tok_iter+"!"); | 
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| [41d023] | 179 | tokenizer::iterator tok_valueiter = tok_paramiter; | 
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|  | 180 | tokenizer::iterator tok_checkiter = ++tok_valueiter; | 
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| [7f570c] | 181 | ASSERT(tok_valueiter != paramtokens.end(), | 
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|  | 182 | "operator<< on FormatParser_Parameters - missing value after ' =' in token "+*tok_iter+"!"); | 
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| [41d023] | 183 | ++tok_checkiter; | 
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| [7f570c] | 184 | ASSERT(tok_checkiter == paramtokens.end(), | 
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|  | 185 | "operator<< on FormatParser_Parameters - still more tokens after ' =' in token "+*tok_iter+":" | 
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|  | 186 | +*tok_checkiter+"!"); | 
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| [41d023] | 187 | LOG(3, "INFO: key is '" << *tok_paramiter << "', value is '" << *tok_valueiter << "'."); | 
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|  | 188 | // TODO: throw exception instead of ASSERT | 
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| [7f570c] | 189 | std::string key(*tok_paramiter); | 
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|  | 190 | std::string value(*tok_valueiter); | 
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|  | 191 | boost::trim(key); | 
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|  | 192 | boost::trim(value); | 
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|  | 193 | tokenizer ticklesstokens(value, ticksep); | 
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|  | 194 | ASSERT(ticklesstokens.begin() != ticklesstokens.end(), | 
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|  | 195 | "operator<< on FormatParser_Parameters - no tokens present after removing ticks in token "+*tok_valueiter+"!"); | 
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|  | 196 | std::stringstream valuestream(*(ticklesstokens.begin())); | 
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|  | 197 | //LOG(2, "INFO: Token pair is " << key << "," << valuestream.str()); | 
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|  | 198 |  | 
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|  | 199 | // TODO: throw exception instead of DoeLog() | 
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|  | 200 | ASSERT(params.haveParameter(key), | 
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|  | 201 | "operator >> on FormatParser_Parameters - unknown parameter name '" | 
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|  | 202 | +key+"' with value "+valuestream.str()+"!"); | 
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|  | 203 | if (params.haveParameter(key)) { | 
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| [6440c6] | 204 | ParameterInterface *instance = params.getParameter(key); | 
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| [118f1e] | 205 | instance->setAsString(valuestream.str()); | 
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| [7f570c] | 206 | } | 
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|  | 207 | } else { | 
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|  | 208 | ist.setstate(std::ios::eofbit); | 
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|  | 209 | } | 
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|  | 210 | } | 
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|  | 211 | return ist; | 
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|  | 212 | } | 
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