| 1 | /*
 | 
|---|
| 2 |  * linkedcell.hpp
 | 
|---|
| 3 |  *
 | 
|---|
| 4 |  *  If the linked cell should be usable, the class has to inherit LCNodeSet and the nodes (containing the Vectors) have to inherit LCNode. This works well
 | 
|---|
| 5 |  *  for molecule and atom classes.
 | 
|---|
| 6 |  *
 | 
|---|
| 7 |  *  Created on: Aug 3, 2009
 | 
|---|
| 8 |  *      Author: heber
 | 
|---|
| 9 |  */
 | 
|---|
| 10 | 
 | 
|---|
| 11 | #ifndef LINKEDCELL_HPP_
 | 
|---|
| 12 | #define LINKEDCELL_HPP_
 | 
|---|
| 13 | 
 | 
|---|
| 14 | using namespace std;
 | 
|---|
| 15 | 
 | 
|---|
| 16 | /*********************************************** includes ***********************************/
 | 
|---|
| 17 | 
 | 
|---|
| 18 | // include config.h
 | 
|---|
| 19 | #ifdef HAVE_CONFIG_H
 | 
|---|
| 20 | #include <config.h>
 | 
|---|
| 21 | #endif
 | 
|---|
| 22 | 
 | 
|---|
| 23 | #include <list>
 | 
|---|
| 24 | #include <vector>
 | 
|---|
| 25 | #include <map>
 | 
|---|
| 26 | 
 | 
|---|
| 27 | //#include "CodePatterns/Assert.hpp"
 | 
|---|
| 28 | //#include "CodePatterns/Log.hpp"
 | 
|---|
| 29 | //#include "CodePatterns/Verbose.hpp"
 | 
|---|
| 30 | #include "Helpers/defs.hpp"
 | 
|---|
| 31 | #include "LinearAlgebra/Vector.hpp"
 | 
|---|
| 32 | #include "World.hpp"
 | 
|---|
| 33 | 
 | 
|---|
| 34 | /****************************************** forward declarations *****************************/
 | 
|---|
| 35 | 
 | 
|---|
| 36 | class IPointCloud;
 | 
|---|
| 37 | class TesselPoint;
 | 
|---|
| 38 | 
 | 
|---|
| 39 | /********************************************** definitions *********************************/
 | 
|---|
| 40 | 
 | 
|---|
| 41 | //< Upper bound for number of cell nodes used in sensibility check on allocation.
 | 
|---|
| 42 | enum { MAX_LINKEDCELLNODES = 1000000 };
 | 
|---|
| 43 | 
 | 
|---|
| 44 | /********************************************** declarations *******************************/
 | 
|---|
| 45 | 
 | 
|---|
| 46 | typedef std::list<TesselPoint *> TesselPointSTLList;
 | 
|---|
| 47 | 
 | 
|---|
| 48 | /** Linked Cell class for containing Vectors in real space efficiently.
 | 
|---|
| 49 |  */
 | 
|---|
| 50 | class LinkedCell_deprecated {
 | 
|---|
| 51 | private:
 | 
|---|
| 52 | 
 | 
|---|
| 53 | public:
 | 
|---|
| 54 |     Vector max;       // upper boundary
 | 
|---|
| 55 |     Vector min;       // lower boundary
 | 
|---|
| 56 |     TesselPointSTLList *LC;  // linked cell list
 | 
|---|
| 57 |     double RADIUS;    // cell edge length
 | 
|---|
| 58 |     int N[NDIM];      // number of cells per axis
 | 
|---|
| 59 |     mutable int n[NDIM];      // temporary variable for current cell per axis
 | 
|---|
| 60 |     mutable int index;        // temporary index variable , access by index = n[0] * N[1] * N[2] + n[1] * N[2] + n[2];
 | 
|---|
| 61 | 
 | 
|---|
| 62 |     LinkedCell_deprecated();
 | 
|---|
| 63 |     LinkedCell_deprecated(IPointCloud &set, const double radius);
 | 
|---|
| 64 |     ~LinkedCell_deprecated();
 | 
|---|
| 65 |     const TesselPointSTLList* GetCurrentCell()const ;
 | 
|---|
| 66 |     const TesselPointSTLList* GetRelativeToCurrentCell(const int relative[NDIM])const ;
 | 
|---|
| 67 |     bool SetIndexToNode(const TesselPoint * const Walker)const ;
 | 
|---|
| 68 |     bool SetIndexToVector(const Vector &x)const ;
 | 
|---|
| 69 |     double SetClosestIndexToOutsideVector(const Vector * const x) const;
 | 
|---|
| 70 |     bool CheckBounds()const ;
 | 
|---|
| 71 |     bool CheckBounds(const int relative[NDIM])const ;
 | 
|---|
| 72 |     void GetNeighbourBounds(int lower[NDIM], int upper[NDIM], int step = 1)const ;
 | 
|---|
| 73 | 
 | 
|---|
| 74 |     TesselPointSTLList* GetallNeighbours(const double distance = 0) const;
 | 
|---|
| 75 |     TesselPointSTLList* GetPointsInsideSphere(const double radius, const Vector * const center) const;
 | 
|---|
| 76 |     // not implemented yet
 | 
|---|
| 77 |     bool AddNode(Vector *Walker);
 | 
|---|
| 78 |     bool DeleteNode(Vector *Walker);
 | 
|---|
| 79 |     bool MoveNode(Vector *Walker);
 | 
|---|
| 80 | };
 | 
|---|
| 81 | 
 | 
|---|
| 82 | #endif /*LINKEDCELL_HPP_*/
 | 
|---|