Candidate_v1.7.0
        stable
      
      
        
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            Last change
 on this file since 399c69 was             5a479d, checked in by Frederik Heber <frederik.heber@…>, 22 months ago           | 
        
        
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Added python actions to generate all graph6 strings. 
 
- graph6 strings don't take permutations in the adjacency matrix
into account. Hence, we are going through every permutation of
non-hydrogens and generate the respective graph6 string.
  
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            File size:
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| [5061d9] | 1 | /*
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 | 2 |  * Graph6Writer.hpp
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 | 3 |  *
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 | 4 |  *  Created on: Apr 2, 2021
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 | 5 |  *      Author: heber
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 | 6 |  */
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 | 7 | 
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 | 8 | 
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 | 9 | #ifndef GRAPH_GRAPH6WRITER_HPP_
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 | 10 | #define GRAPH_GRAPH6WRITER_HPP_
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 | 11 | 
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 | 12 | // include config.h
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 | 13 | #ifdef HAVE_CONFIG_H
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 | 14 | #include <config.h>
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 | 15 | #endif
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 | 16 | 
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 | 17 | #include <iosfwd>
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 | 18 | #include <vector>
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 | 19 | 
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| [1c0b0b] | 20 | #include "types.hpp"
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 | 21 | 
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| [5061d9] | 22 | class atom;
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 | 23 | 
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 | 24 | /** This functor prints a set of atoms as a graph6 formatted strings and returns
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 | 25 |  * all elements as a vector in the same order as the nodes in the graph6
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 | 26 |  * representation.
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 | 27 |  *
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 | 28 |  * This is inspired by https://github.com/adrianN/graph6/, only I found the code
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 | 29 |  * there quite ugly and unnecessarily complicated: inheriting from std::iterator,
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 | 30 |  * overriding all the operators (++, *, ...) for no apparent reason instead of
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 | 31 |  * adding normal functions, ...
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 | 32 |  *
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 | 33 |  */
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 | 34 |  struct Graph6Writer
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 | 35 | {
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 | 36 |    const std::vector<const atom *> _atoms;
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 | 37 | 
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 | 38 |    Graph6Writer(const std::vector<const atom *> atoms);
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 | 39 | 
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 | 40 |    void write_n(std::ostream& out);
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 | 41 | 
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 | 42 |    void write_graph6(std::ostream& out);
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 | 43 | 
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 | 44 |    void write_elementlist(std::ostream& out);
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| [1c0b0b] | 45 | 
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| [5a479d] | 46 |    void write_simple_elementlist(std::ostream& out);
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 | 47 | 
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| [1c0b0b] | 48 | private:
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 | 49 |    atomId_t getBoundaryNonHydrogen() const;
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| [5061d9] | 50 | };
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 | 51 | 
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 | 52 | 
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 | 53 | #endif /* GRAPH_GRAPH6WRITER_HPP_ */
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