| 1 | /* | 
|---|
| 2 | * Project: MoleCuilder | 
|---|
| 3 | * Description: creates and alters molecular systems | 
|---|
| 4 | * Copyright (C)  2012 University of Bonn. All rights reserved. | 
|---|
| 5 | * Copyright (C)  2013 Frederik Heber. All rights reserved. | 
|---|
| 6 | * | 
|---|
| 7 | * | 
|---|
| 8 | *   This file is part of MoleCuilder. | 
|---|
| 9 | * | 
|---|
| 10 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
|---|
| 11 | *    it under the terms of the GNU General Public License as published by | 
|---|
| 12 | *    the Free Software Foundation, either version 2 of the License, or | 
|---|
| 13 | *    (at your option) any later version. | 
|---|
| 14 | * | 
|---|
| 15 | *    MoleCuilder is distributed in the hope that it will be useful, | 
|---|
| 16 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
|---|
| 17 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
|---|
| 18 | *    GNU General Public License for more details. | 
|---|
| 19 | * | 
|---|
| 20 | *    You should have received a copy of the GNU General Public License | 
|---|
| 21 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
|---|
| 22 | */ | 
|---|
| 23 |  | 
|---|
| 24 | /* | 
|---|
| 25 | * IndexedVectors.cpp | 
|---|
| 26 | * | 
|---|
| 27 | *  Created on: 29.07.2012 | 
|---|
| 28 | *      Author: heber | 
|---|
| 29 | */ | 
|---|
| 30 |  | 
|---|
| 31 | // include config.h | 
|---|
| 32 | #ifdef HAVE_CONFIG_H | 
|---|
| 33 | #include <config.h> | 
|---|
| 34 | #endif | 
|---|
| 35 |  | 
|---|
| 36 | #include "CodePatterns/MemDebug.hpp" | 
|---|
| 37 |  | 
|---|
| 38 | #include "Fragmentation/Summation/SetValues/IndexedVectors.hpp" | 
|---|
| 39 |  | 
|---|
| 40 | #include <iostream> | 
|---|
| 41 |  | 
|---|
| 42 | #include "CodePatterns/Assert.hpp" | 
|---|
| 43 |  | 
|---|
| 44 | // static member variables | 
|---|
| 45 | const size_t IndexedVectors::FixedSize = 3; | 
|---|
| 46 | const IndexedVectors::vector_t IndexedVectors::nullvector( FixedSize, 0.); | 
|---|
| 47 |  | 
|---|
| 48 | IndexedVectors::IndexedVectors(const indices_t &_indices, const vectors_t &_vectors) | 
|---|
| 49 | { | 
|---|
| 50 | ASSERT(_indices.size() == _vectors.size(), | 
|---|
| 51 | "IndexedVectors::IndexedVectors() - vector of indices and vectors don't match in size."); | 
|---|
| 52 | indices_t::const_iterator indexiter = _indices.begin(); | 
|---|
| 53 | vectors_t::const_iterator vectoriter = _vectors.begin(); | 
|---|
| 54 | for (; vectoriter != _vectors.end(); ++indexiter, ++vectoriter) { | 
|---|
| 55 | ASSERT( vectoriter->size() == FixedSize, | 
|---|
| 56 | "IndexedVectors::IndexedVectors() - vector to instance " | 
|---|
| 57 | +toString(*indexiter)+" has size " | 
|---|
| 58 | +toString(vectoriter->size())+" different to FixedSize " | 
|---|
| 59 | +toString(FixedSize)+"."); | 
|---|
| 60 | if (*indexiter != (size_t)DropIndex) { // skip all force vectors associated to -1 | 
|---|
| 61 | #ifndef NDEBUG | 
|---|
| 62 | std::pair<indexedvectors_t::iterator, bool> inserter = | 
|---|
| 63 | #endif | 
|---|
| 64 | vectors.insert( std::make_pair( *indexiter, *vectoriter) ); | 
|---|
| 65 | ASSERT( inserter.second, | 
|---|
| 66 | "IndexedVectors::IndexedVectors() - index " | 
|---|
| 67 | +toString(inserter.first->first)+" already present with vector " | 
|---|
| 68 | +toString(inserter.first->second)+"."); | 
|---|
| 69 | } | 
|---|
| 70 | } | 
|---|
| 71 | } | 
|---|
| 72 |  | 
|---|
| 73 | IndexedVectors& IndexedVectors::operator=(const IndexedVectors &other) | 
|---|
| 74 | { | 
|---|
| 75 | // check for self-assignment | 
|---|
| 76 | if (this != &other) { | 
|---|
| 77 | vectors.clear(); | 
|---|
| 78 | vectors = other.vectors; | 
|---|
| 79 | } | 
|---|
| 80 | return *this; | 
|---|
| 81 | } | 
|---|
| 82 |  | 
|---|
| 83 | void IndexedVectors::superposeOtherIndexedVectors(const IndexedVectors &other, const double prefactor) | 
|---|
| 84 | { | 
|---|
| 85 | for (indexedvectors_t::const_iterator otheriter = other.vectors.begin(); | 
|---|
| 86 | otheriter != other.vectors.end(); ++otheriter) { | 
|---|
| 87 | indexedvectors_t::iterator iter = vectors.find(otheriter->first); | 
|---|
| 88 | if (iter == vectors.end()) { | 
|---|
| 89 | // index does not exist | 
|---|
| 90 | std::pair<indexedvectors_t::iterator, bool> inserter = | 
|---|
| 91 | vectors.insert( std::make_pair( otheriter->first, nullvector) ); | 
|---|
| 92 | ASSERT( inserter.second, | 
|---|
| 93 | "IndexedVectors::superposeOtherIndexedVectors() - index is present though unfound before?"); | 
|---|
| 94 | iter = inserter.first; | 
|---|
| 95 | } | 
|---|
| 96 | // now simply vector to index from other instance add with prefactor | 
|---|
| 97 | vector_t::iterator vectoriter = iter->second.begin(); | 
|---|
| 98 | vector_t::const_iterator othervectoriter = otheriter->second.begin(); | 
|---|
| 99 | for (;vectoriter != iter->second.end(); ++vectoriter, ++othervectoriter) { | 
|---|
| 100 | *vectoriter += prefactor * (*othervectoriter); | 
|---|
| 101 | } | 
|---|
| 102 | } | 
|---|
| 103 | } | 
|---|
| 104 |  | 
|---|
| 105 | bool IndexedVectors::operator==(const IndexedVectors& other) const | 
|---|
| 106 | { | 
|---|
| 107 | bool status = vectors == other.vectors; | 
|---|
| 108 | return status; | 
|---|
| 109 | } | 
|---|
| 110 |  | 
|---|
| 111 | std::ostream & operator<<(std::ostream &ost, const IndexedVectors &other) | 
|---|
| 112 | { | 
|---|
| 113 | for (IndexedVectors::indexedvectors_t::const_iterator iter = other.vectors.begin(); | 
|---|
| 114 | iter != other.vectors.end(); ++iter) | 
|---|
| 115 | ost << "(" << iter->first << "," << iter->second << ") "; | 
|---|
| 116 | return ost; | 
|---|
| 117 | } | 
|---|
| 118 |  | 
|---|
| 119 | template<> IndexedVectors ZeroInstance<IndexedVectors>() | 
|---|
| 120 | { | 
|---|
| 121 | IndexedVectors returnvalue; | 
|---|
| 122 | return returnvalue; | 
|---|
| 123 | } | 
|---|