| [7d92f1] | 1 | /* | 
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|  | 2 | * Project: MoleCuilder | 
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|  | 3 | * Description: creates and alters molecular systems | 
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|  | 4 | * Copyright (C)  2012 University of Bonn. All rights reserved. | 
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| [5aaa43] | 5 | * Copyright (C)  2013 Frederik Heber. All rights reserved. | 
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| [7d92f1] | 6 | * | 
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|  | 7 | * | 
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|  | 8 | *   This file is part of MoleCuilder. | 
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|  | 9 | * | 
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|  | 10 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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|  | 11 | *    it under the terms of the GNU General Public License as published by | 
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|  | 12 | *    the Free Software Foundation, either version 2 of the License, or | 
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|  | 13 | *    (at your option) any later version. | 
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|  | 14 | * | 
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|  | 15 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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|  | 16 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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|  | 17 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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|  | 18 | *    GNU General Public License for more details. | 
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|  | 19 | * | 
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|  | 20 | *    You should have received a copy of the GNU General Public License | 
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|  | 21 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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|  | 22 | */ | 
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|  | 23 |  | 
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|  | 24 | /* | 
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|  | 25 | * IndexedVectors.cpp | 
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|  | 26 | * | 
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|  | 27 | *  Created on: 29.07.2012 | 
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|  | 28 | *      Author: heber | 
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|  | 29 | */ | 
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|  | 30 |  | 
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|  | 31 | // include config.h | 
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|  | 32 | #ifdef HAVE_CONFIG_H | 
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|  | 33 | #include <config.h> | 
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|  | 34 | #endif | 
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|  | 35 |  | 
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|  | 36 | #include "CodePatterns/MemDebug.hpp" | 
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|  | 37 |  | 
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| [fbf143] | 38 | #include "Fragmentation/Summation/SetValues/IndexedVectors.hpp" | 
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| [7d92f1] | 39 |  | 
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|  | 40 | #include <iostream> | 
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|  | 41 |  | 
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|  | 42 | #include "CodePatterns/Assert.hpp" | 
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|  | 43 |  | 
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|  | 44 | // static member variables | 
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|  | 45 | const size_t IndexedVectors::FixedSize = 3; | 
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|  | 46 | const IndexedVectors::vector_t IndexedVectors::nullvector( FixedSize, 0.); | 
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|  | 47 |  | 
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|  | 48 | IndexedVectors::IndexedVectors(const indices_t &_indices, const vectors_t &_vectors) | 
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|  | 49 | { | 
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|  | 50 | ASSERT(_indices.size() == _vectors.size(), | 
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|  | 51 | "IndexedVectors::IndexedVectors() - vector of indices and vectors don't match in size."); | 
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|  | 52 | indices_t::const_iterator indexiter = _indices.begin(); | 
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|  | 53 | vectors_t::const_iterator vectoriter = _vectors.begin(); | 
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|  | 54 | for (; vectoriter != _vectors.end(); ++indexiter, ++vectoriter) { | 
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|  | 55 | ASSERT( vectoriter->size() == FixedSize, | 
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|  | 56 | "IndexedVectors::IndexedVectors() - vector to instance " | 
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|  | 57 | +toString(*indexiter)+" has size " | 
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|  | 58 | +toString(vectoriter->size())+" different to FixedSize " | 
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|  | 59 | +toString(FixedSize)+"."); | 
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| [a67a04] | 60 | if (*indexiter != (size_t)DropIndex) { // skip all force vectors associated to -1 | 
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| [7d92f1] | 61 | #ifndef NDEBUG | 
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| [a67a04] | 62 | std::pair<indexedvectors_t::iterator, bool> inserter = | 
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| [7d92f1] | 63 | #endif | 
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| [a67a04] | 64 | vectors.insert( std::make_pair( *indexiter, *vectoriter) ); | 
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|  | 65 | ASSERT( inserter.second, | 
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|  | 66 | "IndexedVectors::IndexedVectors() - index " | 
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|  | 67 | +toString(inserter.first->first)+" already present with vector " | 
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|  | 68 | +toString(inserter.first->second)+"."); | 
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|  | 69 | } | 
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| [7d92f1] | 70 | } | 
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|  | 71 | } | 
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|  | 72 |  | 
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|  | 73 | IndexedVectors& IndexedVectors::operator=(const IndexedVectors &other) | 
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|  | 74 | { | 
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|  | 75 | // check for self-assignment | 
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|  | 76 | if (this != &other) { | 
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|  | 77 | vectors.clear(); | 
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|  | 78 | vectors = other.vectors; | 
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|  | 79 | } | 
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|  | 80 | return *this; | 
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|  | 81 | } | 
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|  | 82 |  | 
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|  | 83 | void IndexedVectors::superposeOtherIndexedVectors(const IndexedVectors &other, const double prefactor) | 
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|  | 84 | { | 
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|  | 85 | for (indexedvectors_t::const_iterator otheriter = other.vectors.begin(); | 
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|  | 86 | otheriter != other.vectors.end(); ++otheriter) { | 
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|  | 87 | indexedvectors_t::iterator iter = vectors.find(otheriter->first); | 
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|  | 88 | if (iter == vectors.end()) { | 
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|  | 89 | // index does not exist | 
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|  | 90 | std::pair<indexedvectors_t::iterator, bool> inserter = | 
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|  | 91 | vectors.insert( std::make_pair( otheriter->first, nullvector) ); | 
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|  | 92 | ASSERT( inserter.second, | 
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|  | 93 | "IndexedVectors::superposeOtherIndexedVectors() - index is present though unfound before?"); | 
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|  | 94 | iter = inserter.first; | 
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|  | 95 | } | 
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|  | 96 | // now simply vector to index from other instance add with prefactor | 
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|  | 97 | vector_t::iterator vectoriter = iter->second.begin(); | 
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|  | 98 | vector_t::const_iterator othervectoriter = otheriter->second.begin(); | 
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|  | 99 | for (;vectoriter != iter->second.end(); ++vectoriter, ++othervectoriter) { | 
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|  | 100 | *vectoriter += prefactor * (*othervectoriter); | 
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|  | 101 | } | 
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|  | 102 | } | 
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|  | 103 | } | 
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|  | 104 |  | 
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| [955051] | 105 | bool IndexedVectors::operator==(const IndexedVectors& other) const | 
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|  | 106 | { | 
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|  | 107 | bool status = vectors == other.vectors; | 
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|  | 108 | return status; | 
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|  | 109 | } | 
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|  | 110 |  | 
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| [7d92f1] | 111 | std::ostream & operator<<(std::ostream &ost, const IndexedVectors &other) | 
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|  | 112 | { | 
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|  | 113 | for (IndexedVectors::indexedvectors_t::const_iterator iter = other.vectors.begin(); | 
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|  | 114 | iter != other.vectors.end(); ++iter) | 
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|  | 115 | ost << "(" << iter->first << "," << iter->second << ") "; | 
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|  | 116 | return ost; | 
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|  | 117 | } | 
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| [beb16e] | 118 |  | 
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|  | 119 | template<> IndexedVectors ZeroInstance<IndexedVectors>() | 
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|  | 120 | { | 
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|  | 121 | IndexedVectors returnvalue; | 
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|  | 122 | return returnvalue; | 
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|  | 123 | } | 
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