| 1 | /*
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| 2 |  * Project: MoleCuilder
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| 3 |  * Description: creates and alters molecular systems
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| 4 |  * Copyright (C)  2012 University of Bonn. All rights reserved.
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| 5 |  * 
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| 6 |  *
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| 7 |  *   This file is part of MoleCuilder.
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| 8 |  *
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| 9 |  *    MoleCuilder is free software: you can redistribute it and/or modify
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| 10 |  *    it under the terms of the GNU General Public License as published by
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| 11 |  *    the Free Software Foundation, either version 2 of the License, or
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| 12 |  *    (at your option) any later version.
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| 13 |  *
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| 14 |  *    MoleCuilder is distributed in the hope that it will be useful,
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| 15 |  *    but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 16 |  *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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| 17 |  *    GNU General Public License for more details.
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| 18 |  *
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| 19 |  *    You should have received a copy of the GNU General Public License
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| 20 |  *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>.
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| 21 |  */
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| 22 | 
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| 23 | /*
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| 24 |  * IndexSetContainer.cpp
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| 25 |  *
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| 26 |  *  Created on: Aug 2, 2012
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| 27 |  *      Author: heber
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| 28 |  */
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| 29 | 
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| 30 | 
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| 31 | // include config.h
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| 32 | #ifdef HAVE_CONFIG_H
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| 33 | #include <config.h>
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| 34 | #endif
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| 35 | 
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| 36 | #include "CodePatterns/MemDebug.hpp"
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| 37 | 
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| 38 | #include "IndexSetContainer.hpp"
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| 39 | 
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| 40 | #include <iterator>
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| 41 | 
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| 42 | #include "CodePatterns/Log.hpp"
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| 43 | 
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| 44 | #include "Fragmentation/Summation/IndexSet.hpp"
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| 45 | #include "Fragmentation/KeySetsContainer.hpp"
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| 46 | 
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| 47 | IndexSet::ptr IndexSetContainer::createSuperSet(const KeySetsContainer &_keysets) const
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| 48 | {
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| 49 |   // create superset
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| 50 |   IndexSet::ptr _AllIndices(new IndexSet);
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| 51 |   for (KeySetsContainer::ArrayOfIntVectors::const_iterator iter = _keysets.KeySets.begin();
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| 52 |       iter != _keysets.KeySets.end(); ++iter)
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| 53 |     for(KeySetsContainer::IntVector::const_iterator keyiter = (*iter).begin();
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| 54 |         keyiter != (*iter).end(); ++keyiter) {
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| 55 |       if (*keyiter != -1)
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| 56 |         _AllIndices->insert((Index_t)*keyiter);
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| 57 |     }
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| 58 |   LOG(1, "INFO: AllIndices is " << *_AllIndices << ".");
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| 59 | 
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| 60 |   return _AllIndices;
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| 61 | }
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| 62 | 
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| 63 | IndexSetContainer::IndexSetContainer(const KeySetsContainer &_keysets) :
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| 64 |      AllIndices(createSuperSet(_keysets))
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| 65 | {
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| 66 |   const size_t SupersetSize = AllIndices->size();
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| 67 |   // create container with all keysets
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| 68 |   for (KeySetsContainer::ArrayOfIntVectors::const_iterator iter = _keysets.KeySets.begin();
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| 69 |       iter != _keysets.KeySets.end(); ++iter) {
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| 70 |     // create the IndexSets ...
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| 71 |     IndexSet tempset;
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| 72 |     for(KeySetsContainer::IntVector::const_iterator keyiter = (*iter).begin();
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| 73 |         keyiter != (*iter).end(); ++keyiter)
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| 74 |       if (*keyiter != -1)
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| 75 |         tempset.insert((Index_t)*keyiter);
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| 76 |     // ... and insert, making sure that super set is AllIndices when present
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| 77 |     if (tempset.size() < SupersetSize)
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| 78 |       insert(tempset);
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| 79 |     else
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| 80 |       insert(AllIndices);
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| 81 |   }
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| 82 | }
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| 83 | 
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| 84 | size_t IndexSetContainer::countSetsTillLevel(const size_t level) const
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| 85 | {
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| 86 |   // check if any sets are present
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| 87 |   if (getContainer().empty())
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| 88 |     return 0;
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| 89 |   // define ends of interval
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| 90 |   SortedVector<IndexSet>::Container_t::const_iterator start = getContainer().begin();
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| 91 |   SortedVector<IndexSet>::Container_t::const_iterator end = --getContainer().end();
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| 92 |   // check whether all are smaller
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| 93 |   if ((*end)->size() <= level)
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| 94 |     return getContainer().size();
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| 95 |   // check whether all are larger
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| 96 |   if ((*start)->size() > level)
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| 97 |     return 0;
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| 98 |   // continue as long as interval has more than one element
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| 99 |   while (std::distance(start, end) > 1) {
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| 100 |     // create iterator in between
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| 101 |     SortedVector<IndexSet>::Container_t::const_iterator midpoint = start;
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| 102 |     std::advance( midpoint, std::distance(start, end)/2 );
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| 103 |     // check iter and half the interval
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| 104 |     if ((*midpoint)->size() <= level)
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| 105 |       start = midpoint;
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| 106 |     else
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| 107 |       end = midpoint;
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| 108 |   }
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| 109 |   return std::distance(getContainer().begin(), end);
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| 110 | }
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