| [fb69e9] | 1 | /*
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 | 2 |  * Project: MoleCuilder
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 | 3 |  * Description: creates and alters molecular systems
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 | 4 |  * Copyright (C)  2012 University of Bonn. All rights reserved.
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 | 5 |  * 
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 | 6 |  *
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 | 7 |  *   This file is part of MoleCuilder.
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 | 8 |  *
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 | 9 |  *    MoleCuilder is free software: you can redistribute it and/or modify
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 | 10 |  *    it under the terms of the GNU General Public License as published by
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 | 11 |  *    the Free Software Foundation, either version 2 of the License, or
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 | 12 |  *    (at your option) any later version.
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 | 13 |  *
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 | 14 |  *    MoleCuilder is distributed in the hope that it will be useful,
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 | 15 |  *    but WITHOUT ANY WARRANTY; without even the implied warranty of
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 | 16 |  *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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 | 17 |  *    GNU General Public License for more details.
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 | 18 |  *
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 | 19 |  *    You should have received a copy of the GNU General Public License
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 | 20 |  *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>.
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 | 21 |  */
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 | 22 | 
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 | 23 | /*
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 | 24 |  * IndexSetContainer.cpp
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 | 25 |  *
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 | 26 |  *  Created on: Aug 2, 2012
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 | 27 |  *      Author: heber
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 | 28 |  */
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 | 29 | 
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 | 30 | 
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 | 31 | // include config.h
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 | 32 | #ifdef HAVE_CONFIG_H
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 | 33 | #include <config.h>
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 | 34 | #endif
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 | 35 | 
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 | 36 | #include "CodePatterns/MemDebug.hpp"
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 | 37 | 
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 | 38 | #include "IndexSetContainer.hpp"
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 | 39 | 
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| [8a0e78] | 40 | #include <iterator>
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 | 41 | 
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| [fb69e9] | 42 | #include "CodePatterns/Log.hpp"
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 | 43 | 
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 | 44 | #include "Fragmentation/Summation/IndexSet.hpp"
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 | 45 | #include "Fragmentation/KeySetsContainer.hpp"
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 | 46 | 
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 | 47 | IndexSet::ptr IndexSetContainer::AllIndices(new IndexSet);
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 | 48 | 
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 | 49 | IndexSet::ptr& IndexSetContainer::createSuperSet(const KeySetsContainer &_keysets) const
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 | 50 | {
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 | 51 |   // create superset
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 | 52 |   //IndexSet::ptr AllIndices(new IndexSet);
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 | 53 |   for (KeySetsContainer::ArrayOfIntVectors::const_iterator iter = _keysets.KeySets.begin();
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 | 54 |       iter != _keysets.KeySets.end(); ++iter)
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 | 55 |     for(KeySetsContainer::IntVector::const_iterator keyiter = (*iter).begin();
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 | 56 |         keyiter != (*iter).end(); ++keyiter) {
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 | 57 |       if (*keyiter != -1)
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 | 58 |         AllIndices->insert((Index_t)*keyiter);
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 | 59 |     }
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 | 60 |   LOG(1, "INFO: AllIndices is " << *AllIndices << ".");
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 | 61 | 
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 | 62 |   return AllIndices;
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 | 63 | }
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 | 64 | 
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 | 65 | IndexSetContainer::IndexSetContainer(const KeySetsContainer &_keysets) :
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 | 66 |   SortedVector<IndexSet>(createSuperSet(_keysets))
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 | 67 | {
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 | 68 |   const size_t SupersetSize = getContainer()[0]->size();
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 | 69 |   // create container with all keysets
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 | 70 |   for (KeySetsContainer::ArrayOfIntVectors::const_iterator iter = _keysets.KeySets.begin();
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 | 71 |       iter != _keysets.KeySets.end(); ++iter) {
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 | 72 |     IndexSet tempset;
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 | 73 |     for(KeySetsContainer::IntVector::const_iterator keyiter = (*iter).begin();
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 | 74 |         keyiter != (*iter).end(); ++keyiter)
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 | 75 |       if (*keyiter != -1)
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 | 76 |         tempset.insert((Index_t)*keyiter);
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 | 77 |     if (tempset.size() < SupersetSize)  // only insert if not super set
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 | 78 |       insert(tempset);
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 | 79 |   }
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 | 80 | }
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| [8a0e78] | 81 | 
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 | 82 | size_t IndexSetContainer::countSetsTillLevel(const size_t level) const
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 | 83 | {
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 | 84 |   // check if any sets are present
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 | 85 |   if (getContainer().empty())
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 | 86 |     return 0;
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 | 87 |   // define ends of interval
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 | 88 |   SortedVector<IndexSet>::Container_t::const_iterator start = getContainer().begin();
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 | 89 |   SortedVector<IndexSet>::Container_t::const_iterator end = --getContainer().end();
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 | 90 |   // check whether all are smaller
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 | 91 |   if ((*end)->size() <= level)
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 | 92 |     return getContainer().size();
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 | 93 |   // check whether all are larger
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 | 94 |   if ((*start)->size() > level)
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 | 95 |     return 0;
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 | 96 |   // continue as long as interval has more than one element
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 | 97 |   while (std::distance(start, end) > 1) {
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 | 98 |     // create iterator in between
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 | 99 |     SortedVector<IndexSet>::Container_t::const_iterator midpoint = start;
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 | 100 |     std::advance( midpoint, std::distance(start, end)/2 );
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 | 101 |     // check iter and half the interval
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 | 102 |     if ((*midpoint)->size() <= level)
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 | 103 |       start = midpoint;
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 | 104 |     else
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 | 105 |       end = midpoint;
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 | 106 |   }
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 | 107 |   return std::distance(getContainer().begin(), end);
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 | 108 | }
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