| [fb69e9] | 1 | /* | 
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|  | 2 | * Project: MoleCuilder | 
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|  | 3 | * Description: creates and alters molecular systems | 
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|  | 4 | * Copyright (C)  2012 University of Bonn. All rights reserved. | 
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|  | 5 | * | 
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|  | 6 | * | 
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|  | 7 | *   This file is part of MoleCuilder. | 
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|  | 8 | * | 
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|  | 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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|  | 10 | *    it under the terms of the GNU General Public License as published by | 
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|  | 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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|  | 12 | *    (at your option) any later version. | 
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|  | 13 | * | 
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|  | 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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|  | 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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|  | 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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|  | 17 | *    GNU General Public License for more details. | 
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|  | 18 | * | 
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|  | 19 | *    You should have received a copy of the GNU General Public License | 
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|  | 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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|  | 21 | */ | 
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|  | 22 |  | 
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|  | 23 | /* | 
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|  | 24 | * IndexSetContainer.cpp | 
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|  | 25 | * | 
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|  | 26 | *  Created on: Aug 2, 2012 | 
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|  | 27 | *      Author: heber | 
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|  | 28 | */ | 
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|  | 29 |  | 
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|  | 30 |  | 
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|  | 31 | // include config.h | 
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|  | 32 | #ifdef HAVE_CONFIG_H | 
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|  | 33 | #include <config.h> | 
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|  | 34 | #endif | 
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|  | 35 |  | 
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|  | 36 | #include "CodePatterns/MemDebug.hpp" | 
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|  | 37 |  | 
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|  | 38 | #include "IndexSetContainer.hpp" | 
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|  | 39 |  | 
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| [8a0e78] | 40 | #include <iterator> | 
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|  | 41 |  | 
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| [fb69e9] | 42 | #include "CodePatterns/Log.hpp" | 
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|  | 43 |  | 
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|  | 44 | #include "Fragmentation/Summation/IndexSet.hpp" | 
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|  | 45 | #include "Fragmentation/KeySetsContainer.hpp" | 
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|  | 46 |  | 
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| [19c50e] | 47 | IndexSet::ptr IndexSetContainer::createSuperSet(const KeySetsContainer &_keysets) const | 
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| [fb69e9] | 48 | { | 
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|  | 49 | // create superset | 
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| [19c50e] | 50 | IndexSet::ptr _AllIndices(new IndexSet); | 
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| [fb69e9] | 51 | for (KeySetsContainer::ArrayOfIntVectors::const_iterator iter = _keysets.KeySets.begin(); | 
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|  | 52 | iter != _keysets.KeySets.end(); ++iter) | 
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|  | 53 | for(KeySetsContainer::IntVector::const_iterator keyiter = (*iter).begin(); | 
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|  | 54 | keyiter != (*iter).end(); ++keyiter) { | 
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|  | 55 | if (*keyiter != -1) | 
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| [19c50e] | 56 | _AllIndices->insert((Index_t)*keyiter); | 
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| [fb69e9] | 57 | } | 
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| [19c50e] | 58 | LOG(1, "INFO: AllIndices is " << *_AllIndices << "."); | 
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| [fb69e9] | 59 |  | 
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| [19c50e] | 60 | return _AllIndices; | 
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| [fb69e9] | 61 | } | 
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|  | 62 |  | 
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|  | 63 | IndexSetContainer::IndexSetContainer(const KeySetsContainer &_keysets) : | 
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| [19c50e] | 64 | AllIndices(createSuperSet(_keysets)) | 
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| [fb69e9] | 65 | { | 
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| [19c50e] | 66 | const size_t SupersetSize = AllIndices->size(); | 
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| [fb69e9] | 67 | // create container with all keysets | 
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|  | 68 | for (KeySetsContainer::ArrayOfIntVectors::const_iterator iter = _keysets.KeySets.begin(); | 
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|  | 69 | iter != _keysets.KeySets.end(); ++iter) { | 
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| [19c50e] | 70 | // create the IndexSets ... | 
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| [fb69e9] | 71 | IndexSet tempset; | 
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|  | 72 | for(KeySetsContainer::IntVector::const_iterator keyiter = (*iter).begin(); | 
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|  | 73 | keyiter != (*iter).end(); ++keyiter) | 
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|  | 74 | if (*keyiter != -1) | 
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|  | 75 | tempset.insert((Index_t)*keyiter); | 
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| [19c50e] | 76 | // ... and insert, making sure that super set is AllIndices when present | 
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|  | 77 | if (tempset.size() < SupersetSize) | 
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| [fb69e9] | 78 | insert(tempset); | 
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| [19c50e] | 79 | else | 
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|  | 80 | insert(AllIndices); | 
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| [fb69e9] | 81 | } | 
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|  | 82 | } | 
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| [8a0e78] | 83 |  | 
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|  | 84 | size_t IndexSetContainer::countSetsTillLevel(const size_t level) const | 
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|  | 85 | { | 
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|  | 86 | // check if any sets are present | 
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|  | 87 | if (getContainer().empty()) | 
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|  | 88 | return 0; | 
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|  | 89 | // define ends of interval | 
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|  | 90 | SortedVector<IndexSet>::Container_t::const_iterator start = getContainer().begin(); | 
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|  | 91 | SortedVector<IndexSet>::Container_t::const_iterator end = --getContainer().end(); | 
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|  | 92 | // check whether all are smaller | 
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|  | 93 | if ((*end)->size() <= level) | 
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|  | 94 | return getContainer().size(); | 
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|  | 95 | // check whether all are larger | 
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|  | 96 | if ((*start)->size() > level) | 
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|  | 97 | return 0; | 
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|  | 98 | // continue as long as interval has more than one element | 
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|  | 99 | while (std::distance(start, end) > 1) { | 
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|  | 100 | // create iterator in between | 
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|  | 101 | SortedVector<IndexSet>::Container_t::const_iterator midpoint = start; | 
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|  | 102 | std::advance( midpoint, std::distance(start, end)/2 ); | 
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|  | 103 | // check iter and half the interval | 
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|  | 104 | if ((*midpoint)->size() <= level) | 
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|  | 105 | start = midpoint; | 
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|  | 106 | else | 
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|  | 107 | end = midpoint; | 
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|  | 108 | } | 
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|  | 109 | return std::distance(getContainer().begin(), end); | 
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|  | 110 | } | 
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