| [cc276e] | 1 | /*
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 | 2 |  * Project: MoleCuilder
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 | 3 |  * Description: creates and alters molecular systems
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 | 4 |  * Copyright (C)  2012 University of Bonn. All rights reserved.
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| [5aaa43] | 5 |  * Copyright (C)  2013 Frederik Heber. All rights reserved.
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| [94d5ac6] | 6 |  * 
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 | 7 |  *
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 | 8 |  *   This file is part of MoleCuilder.
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 | 9 |  *
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 | 10 |  *    MoleCuilder is free software: you can redistribute it and/or modify
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 | 11 |  *    it under the terms of the GNU General Public License as published by
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 | 12 |  *    the Free Software Foundation, either version 2 of the License, or
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 | 13 |  *    (at your option) any later version.
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 | 14 |  *
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 | 15 |  *    MoleCuilder is distributed in the hope that it will be useful,
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 | 16 |  *    but WITHOUT ANY WARRANTY; without even the implied warranty of
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 | 17 |  *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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 | 18 |  *    GNU General Public License for more details.
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 | 19 |  *
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 | 20 |  *    You should have received a copy of the GNU General Public License
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 | 21 |  *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>.
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| [cc276e] | 22 |  */
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 | 23 | 
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 | 24 | /*
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 | 25 |  * MPQCCommandJob_MPQCData.cpp
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 | 26 |  *
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 | 27 |  *  Created on: Feb 08, 2012
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 | 28 |  *      Author: heber
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 | 29 |  */
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 | 30 | 
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 | 31 | // include config.h
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 | 32 | #ifdef HAVE_CONFIG_H
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 | 33 | #include <config.h>
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 | 34 | #endif
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 | 35 | 
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 | 36 | #include "CodePatterns/MemDebug.hpp"
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 | 37 | 
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| [4bc75d] | 38 | #include "MPQCData.hpp"
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| [cc276e] | 39 | 
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| [509014] | 40 | #include <iostream>
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| [cc276e] | 41 | #include <limits>
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 | 42 | 
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 | 43 | #include "CodePatterns/Log.hpp"
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| [004d5c] | 44 | #include "LinearAlgebra/defs.hpp"
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 | 45 | 
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| [28c025] | 46 | MPQCData::MPQCData(const SamplingGridProperties &_props) :
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| [503acc1] | 47 |   DoLongrange(DontSampleDensity),
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| [6ff62c] | 48 |   DoValenceOnly(DoSampleValenceOnly),
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| [9ff818] | 49 |   sampled_grid(_props),
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 | 50 |   accuracy(0.),
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 | 51 |   desired_accuracy(0.)
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| [28c025] | 52 | {}
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 | 53 | 
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| [503acc1] | 54 | MPQCData::MPQCData() :
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| [6ff62c] | 55 |   DoLongrange(DontSampleDensity),
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| [9ff818] | 56 |   DoValenceOnly(DoSampleValenceOnly),
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 | 57 |   accuracy(0.),
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 | 58 |   desired_accuracy(0.)
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| [28c025] | 59 | {}
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 | 60 | 
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| [a9558f] | 61 | MPQCData::energy_t::energy_t() :
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 | 62 |   total(0.),
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 | 63 |   nuclear_repulsion(0.),
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| [adccae] | 64 |   electron_coulomb(0.),
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 | 65 |   electron_exchange(0.),
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| [a9558f] | 66 |   correlation(0.),
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 | 67 |   overlap(0.),
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 | 68 |   kinetic(0.),
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 | 69 |   hcore(0.)
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| [cc276e] | 70 | {}
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 | 71 | 
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| [a9558f] | 72 | MPQCData::times_t::times_t() :
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| [4aee30] | 73 |   total_walltime(0.),
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 | 74 |   total_cputime(0.),
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 | 75 |   total_flops(0.),
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 | 76 |   gather_walltime(0.),
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 | 77 |   gather_cputime(0.),
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 | 78 |   gather_flops(0.)
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| [cc276e] | 79 | {}
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 | 80 | 
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 | 81 | /** Comparator for class MPQCData.
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 | 82 |  *
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 | 83 |  */
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 | 84 | bool MPQCData::operator==(const MPQCData &other) const
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 | 85 | {
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| [a9558f] | 86 |   if (fabs(energies.total - other.energies.total) > std::numeric_limits<double>::epsilon()) {
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| [cc276e] | 87 |     LOG(1, "INFO: Energy's in MPQCData differ: "
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| [a9558f] | 88 |         << energies.total << " != " << other.energies.total << ".");
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| [cc276e] | 89 |     return false;
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 | 90 |   }
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 | 91 |   if (forces.size() != other.forces.size()) {
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 | 92 |     LOG(1, "INFO: Forces's in MPQCData differ in size: "
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 | 93 |         << forces.size() << " != " << other.forces.size() << ".");
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 | 94 |     return false;
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 | 95 |   }
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 | 96 |   for (size_t i = 0; i < forces.size(); ++i)
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 | 97 |     for (size_t index = 0; index < NDIM; ++index)
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 | 98 |       if (fabs(forces[i][index] - other.forces[i][index]) > std::numeric_limits<double>::epsilon()) {
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 | 99 |         LOG(1, "INFO: " << index << "th component of force of particle "
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 | 100 |             << i << " in MPQCData differ: " << forces[i][index]
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 | 101 |             << " != " << other.forces[i][index] << ".");
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 | 102 |         return false;
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 | 103 |       }
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 | 104 |   return true;
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 | 105 | }
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| [509014] | 106 | 
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| [2ebfd7] | 107 | void MPQCData::assignWithDownsampledGrid(
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 | 108 |     MPQCData &instance,
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 | 109 |     const MPQCData &other)
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 | 110 | {
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 | 111 |   if (&instance != &other) {
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 | 112 |     instance.energies = other.energies;
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 | 113 |     instance.forces = other.forces;
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 | 114 |     instance.DoLongrange = other.DoLongrange;
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 | 115 |     instance.DoValenceOnly = other.DoValenceOnly;
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 | 116 |     /** We need to return from the local grid of the fragment to the global
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 | 117 |      * grid and change the level in such a way that the gridpoints remain exactly
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 | 118 |      * the same.
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 | 119 |      */
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 | 120 |     SamplingGridProperties domain(instance.sampled_grid);
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 | 121 |     //!> we need to downsample by the difference in levels and by the smaller grid size
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 | 122 |     const double surplus_level = instance.sampled_grid.getSurplusLevel(other.sampled_grid);
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 | 123 |     ASSERT( fabs(surplus_level - round(surplus_level)) < std::numeric_limits<double>::epsilon()*1e4,
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 | 124 |         "MPQCData::assignWithDownsampledGrid() - surplus level is not integer: "
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 | 125 |         +toString(surplus_level));
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 | 126 |     const int downsample_level =
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 | 127 |         (other.sampled_grid.level - instance.sampled_grid.level) + round(surplus_level);
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 | 128 |     // downsample the stored grid values to the coarser grid
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 | 129 |     SamplingGrid::downsample(
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 | 130 |         instance.sampled_grid, other.sampled_grid,
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 | 131 |         other.sampled_grid.level - downsample_level);
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 | 132 |     // then we can simply take over
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 | 133 | #ifndef NDEBUG
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 | 134 |     const size_t window_gridpoints = instance.sampled_grid.getWindowGridPoints();
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 | 135 | #endif
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 | 136 |     static_cast<SamplingGridProperties &>(instance.sampled_grid) = domain;
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 | 137 |     ASSERT(instance.sampled_grid.getWindowGridPoints() == window_gridpoints,
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 | 138 |         "MPQCData::assignWithDownsampledGrid() - number of window gridpoints is "
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 | 139 |         +toString(instance.sampled_grid.getWindowGridPoints())+" and was "+toString(window_gridpoints));
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 | 140 |     instance.positions = other.positions;
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 | 141 |     instance.charges = other.charges;
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 | 142 |     instance.times = other.times;
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 | 143 |     instance.accuracy = other.accuracy;
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 | 144 |     instance.desired_accuracy = other.desired_accuracy;
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 | 145 |   }
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 | 146 | }
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 | 147 | 
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| [509014] | 148 | std::ostream & operator<<(std::ostream &ost, const MPQCData &data)
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 | 149 | {
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| [a9558f] | 150 |   ost << "Energy: " << data.energies.total << "\t";
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 | 151 |   ost << "Forces: " << data.forces << "\t";
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| [4aee30] | 152 |   ost << "Times: " << data.times.total_walltime << ", "
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 | 153 |       << data.times.total_cputime << ", "
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| [9ff818] | 154 |       << data.times.total_flops << ", ";
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 | 155 |   ost << "Accuracy: " << data.accuracy << "\t";
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 | 156 |   ost << "Desired accuracy: " << data.desired_accuracy << "\t";
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| [509014] | 157 |   return ost;
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 | 158 | }
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