| [a3427f] | 1 | /* | 
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|  | 2 | * FragmentationResultContainer.hpp | 
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|  | 3 | * | 
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|  | 4 | *  Created on: Mar 8, 2013 | 
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|  | 5 | *      Author: heber | 
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|  | 6 | */ | 
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|  | 7 |  | 
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|  | 8 | #ifndef FRAGMENTATIONRESULTCONTAINER_HPP_ | 
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|  | 9 | #define FRAGMENTATIONRESULTCONTAINER_HPP_ | 
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|  | 10 |  | 
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|  | 11 | // include config.h | 
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|  | 12 | #ifdef HAVE_CONFIG_H | 
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|  | 13 | #include <config.h> | 
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|  | 14 | #endif | 
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|  | 15 |  | 
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| [55e1bc] | 16 | #include <boost/serialization/access.hpp> | 
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| [a2a2f7] | 17 | #include <boost/serialization/map.hpp> | 
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|  | 18 | #include <boost/serialization/split_member.hpp> | 
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|  | 19 | #include <boost/serialization/version.hpp> | 
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| [a3427f] | 20 | #include "CodePatterns/Singleton.hpp" | 
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|  | 21 |  | 
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| [55e1bc] | 22 | #include <boost/filesystem/path.hpp> | 
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| [a3427f] | 23 | #include <map> | 
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|  | 24 |  | 
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| [d20ded] | 25 | #include "CodePatterns/Observer/Observable.hpp" | 
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|  | 26 |  | 
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| [a3427f] | 27 | #ifdef HAVE_JOBMARKET | 
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|  | 28 | #include "JobMarket/types.hpp" | 
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|  | 29 | #else | 
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|  | 30 | typedef size_t JobId_t; | 
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|  | 31 | #endif | 
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|  | 32 |  | 
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|  | 33 | #include "Fragmentation/KeySetsContainer.hpp" | 
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| [c8d13f5] | 34 | #include "Fragmentation/Summation/IndexSet.hpp" | 
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|  | 35 | #include "Fragmentation/Summation/Containers/FragmentationShortRangeResults.hpp" | 
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| [a3427f] | 36 | #include "Fragmentation/Summation/Containers/MPQCData.hpp" | 
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| [c8d13f5] | 37 | #include "Fragmentation/Summation/Containers/MPQCDataMap.hpp" | 
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| [18ed8c] | 38 | #if defined(HAVE_JOBMARKET) && defined(HAVE_VMG) | 
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| [a3427f] | 39 | #include "Fragmentation/Summation/Containers/VMGData.hpp" | 
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|  | 40 | #endif | 
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|  | 41 |  | 
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|  | 42 | /** This class stores results from lengthy fragmentation calculations, e.g. | 
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|  | 43 | * coming out of FragmentationAutomationAction. | 
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|  | 44 | * | 
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|  | 45 | * The idea is that we can play around with results without having to recalculate | 
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| [55e1bc] | 46 | * results in between. Hence, we place results into this container which we may | 
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|  | 47 | * full serialize. | 
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| [a3427f] | 48 | */ | 
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| [d20ded] | 49 | class FragmentationResultContainer : | 
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|  | 50 | public Singleton<FragmentationResultContainer>, | 
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|  | 51 | public Observable | 
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| [a3427f] | 52 | { | 
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|  | 53 | //!> Singleton patterns needs access to private cstor/dtor. | 
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|  | 54 | friend class Singleton<FragmentationResultContainer>; | 
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|  | 55 | private: | 
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|  | 56 | FragmentationResultContainer() : | 
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| [d20ded] | 57 | Observable("FragmentationResultContainer"), | 
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| [a3427f] | 58 | ResultsType(BothRanges) | 
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|  | 59 | {} | 
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|  | 60 | ~FragmentationResultContainer() {} | 
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|  | 61 |  | 
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|  | 62 | public: | 
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|  | 63 | //!> typedef for short range data container | 
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|  | 64 | typedef std::map<JobId_t, MPQCData> shortrangedata_t; | 
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| [18ed8c] | 65 | #if defined(HAVE_JOBMARKET) && defined(HAVE_VMG) | 
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| [a3427f] | 66 | //!> typedef for long range data container | 
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|  | 67 | typedef std::map<JobId_t, VMGData> longrangedata_t; | 
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|  | 68 | #endif | 
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|  | 69 |  | 
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| [18ed8c] | 70 | #if defined(HAVE_JOBMARKET) && defined(HAVE_VMG) | 
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| [a3427f] | 71 | /** Adds a a set of both short and long range results. | 
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|  | 72 | * | 
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|  | 73 | * Adds all the containers to the ones present in this instance. | 
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|  | 74 | * | 
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|  | 75 | * \param _keysets | 
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| [adb51ab] | 76 | * \param _forcekeysetskeysets | 
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| [a3427f] | 77 | * \param _shortrangedata | 
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|  | 78 | * \param _longrangedata | 
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|  | 79 | */ | 
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|  | 80 | void addFullResults( | 
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|  | 81 | const KeySetsContainer &_keysets, | 
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|  | 82 | const KeySetsContainer &_forcekeysets, | 
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|  | 83 | const shortrangedata_t &_shortrangedata, | 
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|  | 84 | const longrangedata_t &_longrangedata | 
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|  | 85 | ); | 
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|  | 86 | #endif | 
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|  | 87 |  | 
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|  | 88 | /** Adds a a set of short range results only. | 
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|  | 89 | * | 
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|  | 90 | * Adds all the containers to the ones present in this instance. | 
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|  | 91 | * | 
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|  | 92 | * \param _keysets | 
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|  | 93 | * \param _forcekeysets | 
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|  | 94 | * \param _shortrangedata | 
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|  | 95 | */ | 
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|  | 96 | void addShortRangeResults( | 
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|  | 97 | const KeySetsContainer &_keysets, | 
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|  | 98 | const KeySetsContainer &_forcekeysets, | 
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|  | 99 | const shortrangedata_t &_shortrangedata | 
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|  | 100 | ); | 
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|  | 101 |  | 
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| [c8d13f5] | 102 | /** Adds a a set of summed short range results. | 
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|  | 103 | * | 
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|  | 104 | * Adds all the containers to the ones present in this instance. | 
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|  | 105 | * | 
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|  | 106 | * \param _summedshortrange energy results per index set | 
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|  | 107 | */ | 
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|  | 108 | void addShortRangeSummedResults( | 
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|  | 109 | const FragmentationShortRangeResults::summedshortrange_t &_summedshortrange | 
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|  | 110 | ); | 
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|  | 111 |  | 
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| [adb51ab] | 112 | /** Adds given cycles to internal keyset list. | 
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|  | 113 | * | 
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|  | 114 | * \param _cycles keysets of cycles to add | 
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|  | 115 | */ | 
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|  | 116 | void addCycles(const KeySetsContainer &_cycles) | 
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|  | 117 | { cycles.insert(_cycles); } | 
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|  | 118 |  | 
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| [a3427f] | 119 | /** Clears all internal containers. | 
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|  | 120 | * | 
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|  | 121 | * \note Also resets ResultsType. | 
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|  | 122 | */ | 
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|  | 123 | void clear() | 
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|  | 124 | { | 
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| [d20ded] | 125 | OBSERVE; | 
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| [a3427f] | 126 | keysets.clear(); | 
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|  | 127 | forcekeysets.clear(); | 
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|  | 128 | shortrangedata.clear(); | 
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| [c8d13f5] | 129 | summedshortrange.clear(); | 
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| [18ed8c] | 130 | #if defined(HAVE_JOBMARKET) && defined(HAVE_VMG) | 
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| [a3427f] | 131 | longrangedata.clear(); | 
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|  | 132 | #endif | 
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|  | 133 | ResultsType = BothRanges; | 
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|  | 134 | } | 
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|  | 135 |  | 
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|  | 136 | const KeySetsContainer &getKeySets() const { return keysets; } | 
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| [adb51ab] | 137 | const KeySetsContainer &getCycles() const { return cycles; } | 
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| [a3427f] | 138 | const KeySetsContainer &getForceKeySets() const  { return forcekeysets; } | 
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|  | 139 | const shortrangedata_t& getShortRangeResults() const  { return shortrangedata; } | 
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| [c8d13f5] | 140 | const FragmentationShortRangeResults::summedshortrange_t& getShortRangeSummedResults() const  { return summedshortrange; } | 
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| [18ed8c] | 141 | #if defined(HAVE_JOBMARKET) && defined(HAVE_VMG) | 
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| [a3427f] | 142 | const longrangedata_t& getLongRangeResults() const; | 
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|  | 143 | #endif | 
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|  | 144 | bool areFullRangeResultsPresent() const { return (ResultsType == BothRanges); } | 
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|  | 145 |  | 
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|  | 146 | private: | 
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|  | 147 | //!> indicates whether we contain short range only or both results | 
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|  | 148 | enum ResultsType_t { | 
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|  | 149 | ShortRangeOnly, | 
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|  | 150 | BothRanges, | 
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|  | 151 | } ResultsType; | 
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|  | 152 |  | 
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|  | 153 | //!> container for all KeySet's without hydrogens to the jobs | 
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|  | 154 | KeySetsContainer keysets; | 
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|  | 155 | //!> container for all KeySet's with all except saturation hydrogen to the jobs | 
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|  | 156 | KeySetsContainer forcekeysets; | 
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|  | 157 | //!> container for all short-range results | 
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|  | 158 | std::map<JobId_t, MPQCData> shortrangedata; | 
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| [adb51ab] | 159 | //! container of all cycle keysets | 
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|  | 160 | KeySetsContainer cycles; | 
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| [c8d13f5] | 161 | //!> container for summed up results per index set | 
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|  | 162 | FragmentationShortRangeResults::summedshortrange_t summedshortrange; | 
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| [a3427f] | 163 |  | 
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| [18ed8c] | 164 | #if defined(HAVE_JOBMARKET) && defined(HAVE_VMG) | 
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| [a3427f] | 165 | //!> container for all long-range results | 
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|  | 166 | std::map<JobId_t, VMGData> longrangedata; | 
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|  | 167 | #endif | 
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| [55e1bc] | 168 |  | 
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|  | 169 | friend class boost::serialization::access; | 
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|  | 170 | // serialization | 
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|  | 171 | template <typename Archive> | 
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| [a2a2f7] | 172 | void load(Archive& ar, const unsigned int version) | 
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|  | 173 | { | 
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|  | 174 | OBSERVE; | 
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|  | 175 | ar & ResultsType; | 
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|  | 176 | ar & keysets; | 
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|  | 177 | ar & forcekeysets; | 
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|  | 178 | ar & shortrangedata; | 
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|  | 179 | if (version > 0) | 
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|  | 180 | ar & cycles; | 
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|  | 181 | if (version > 1) | 
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|  | 182 | ar & summedshortrange; | 
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| [18ed8c] | 183 | #if defined(HAVE_JOBMARKET) && defined(HAVE_VMG) | 
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| [a2a2f7] | 184 | ar & longrangedata; | 
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|  | 185 | #endif | 
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|  | 186 | } | 
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|  | 187 | template <typename Archive> | 
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|  | 188 | void save(Archive& ar, const unsigned int version) const | 
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| [55e1bc] | 189 | { | 
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|  | 190 | ar & ResultsType; | 
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|  | 191 | ar & keysets; | 
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|  | 192 | ar & forcekeysets; | 
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|  | 193 | ar & shortrangedata; | 
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| [adb51ab] | 194 | if (version > 0) | 
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|  | 195 | ar & cycles; | 
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| [c8d13f5] | 196 | if (version > 1) | 
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|  | 197 | ar & summedshortrange; | 
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| [18ed8c] | 198 | #if defined(HAVE_JOBMARKET) && defined(HAVE_VMG) | 
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| [55e1bc] | 199 | ar & longrangedata; | 
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|  | 200 | #endif | 
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|  | 201 | } | 
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| [a2a2f7] | 202 | BOOST_SERIALIZATION_SPLIT_MEMBER() | 
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| [a3427f] | 203 | }; | 
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|  | 204 |  | 
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| [adb51ab] | 205 | // version for serialized information associated to FragmentationResultContainer | 
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| [c8d13f5] | 206 | BOOST_CLASS_VERSION(FragmentationResultContainer, 2) | 
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| [adb51ab] | 207 |  | 
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| [a3427f] | 208 | #endif /* FRAGMENTATIONRESULTCONTAINER_HPP_ */ | 
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