| [a3427f] | 1 | /*
 | 
|---|
 | 2 |  * FragmentationResultContainer.hpp
 | 
|---|
 | 3 |  *
 | 
|---|
 | 4 |  *  Created on: Mar 8, 2013
 | 
|---|
 | 5 |  *      Author: heber
 | 
|---|
 | 6 |  */
 | 
|---|
 | 7 | 
 | 
|---|
 | 8 | #ifndef FRAGMENTATIONRESULTCONTAINER_HPP_
 | 
|---|
 | 9 | #define FRAGMENTATIONRESULTCONTAINER_HPP_
 | 
|---|
 | 10 | 
 | 
|---|
 | 11 | // include config.h
 | 
|---|
 | 12 | #ifdef HAVE_CONFIG_H
 | 
|---|
 | 13 | #include <config.h>
 | 
|---|
 | 14 | #endif
 | 
|---|
 | 15 | 
 | 
|---|
| [55e1bc] | 16 | #include <boost/serialization/access.hpp>
 | 
|---|
| [a3427f] | 17 | #include "CodePatterns/Singleton.hpp"
 | 
|---|
 | 18 | 
 | 
|---|
| [55e1bc] | 19 | #include <boost/filesystem/path.hpp>
 | 
|---|
| [a3427f] | 20 | #include <map>
 | 
|---|
 | 21 | 
 | 
|---|
 | 22 | #ifdef HAVE_JOBMARKET
 | 
|---|
 | 23 | #include "JobMarket/types.hpp"
 | 
|---|
 | 24 | #else
 | 
|---|
 | 25 | typedef size_t JobId_t;
 | 
|---|
 | 26 | #endif
 | 
|---|
 | 27 | 
 | 
|---|
 | 28 | #include "Fragmentation/KeySetsContainer.hpp"
 | 
|---|
 | 29 | #include "Fragmentation/Summation/Containers/MPQCData.hpp"
 | 
|---|
 | 30 | #ifdef HAVE_VMG
 | 
|---|
 | 31 | #include "Fragmentation/Summation/Containers/VMGData.hpp"
 | 
|---|
 | 32 | #endif
 | 
|---|
 | 33 | 
 | 
|---|
 | 34 | /** This class stores results from lengthy fragmentation calculations, e.g.
 | 
|---|
 | 35 |  * coming out of FragmentationAutomationAction.
 | 
|---|
 | 36 |  *
 | 
|---|
 | 37 |  * The idea is that we can play around with results without having to recalculate
 | 
|---|
| [55e1bc] | 38 |  * results in between. Hence, we place results into this container which we may
 | 
|---|
 | 39 |  * full serialize.
 | 
|---|
| [a3427f] | 40 |  */
 | 
|---|
 | 41 | class FragmentationResultContainer: public Singleton<FragmentationResultContainer>
 | 
|---|
 | 42 | {
 | 
|---|
 | 43 |   //!> Singleton patterns needs access to private cstor/dtor.
 | 
|---|
 | 44 |   friend class Singleton<FragmentationResultContainer>;
 | 
|---|
 | 45 | private:
 | 
|---|
 | 46 |   FragmentationResultContainer() :
 | 
|---|
 | 47 |     ResultsType(BothRanges)
 | 
|---|
 | 48 |   {}
 | 
|---|
 | 49 |   ~FragmentationResultContainer() {}
 | 
|---|
 | 50 | 
 | 
|---|
 | 51 | public:
 | 
|---|
 | 52 |   //!> typedef for short range data container
 | 
|---|
 | 53 |   typedef std::map<JobId_t, MPQCData> shortrangedata_t;
 | 
|---|
 | 54 | #ifdef HAVE_VMG
 | 
|---|
 | 55 |   //!> typedef for long range data container
 | 
|---|
 | 56 |   typedef std::map<JobId_t, VMGData> longrangedata_t;
 | 
|---|
 | 57 | #endif
 | 
|---|
 | 58 | 
 | 
|---|
 | 59 | #ifdef HAVE_VMG
 | 
|---|
 | 60 |   /** Adds a a set of both short and long range results.
 | 
|---|
 | 61 |    *
 | 
|---|
 | 62 |    * Adds all the containers to the ones present in this instance.
 | 
|---|
 | 63 |    *
 | 
|---|
 | 64 |    * \param _keysets
 | 
|---|
 | 65 |    * \param _forcekeysets
 | 
|---|
 | 66 |    * \param _shortrangedata
 | 
|---|
 | 67 |    * \param _longrangedata
 | 
|---|
 | 68 |    */
 | 
|---|
 | 69 |   void addFullResults(
 | 
|---|
 | 70 |       const KeySetsContainer &_keysets,
 | 
|---|
 | 71 |       const KeySetsContainer &_forcekeysets,
 | 
|---|
 | 72 |       const shortrangedata_t &_shortrangedata,
 | 
|---|
 | 73 |       const longrangedata_t &_longrangedata
 | 
|---|
 | 74 |       );
 | 
|---|
 | 75 | #endif
 | 
|---|
 | 76 | 
 | 
|---|
 | 77 |   /** Adds a a set of short range results only.
 | 
|---|
 | 78 |    *
 | 
|---|
 | 79 |    * Adds all the containers to the ones present in this instance.
 | 
|---|
 | 80 |    *
 | 
|---|
 | 81 |    * \param _keysets
 | 
|---|
 | 82 |    * \param _forcekeysets
 | 
|---|
 | 83 |    * \param _shortrangedata
 | 
|---|
 | 84 |    */
 | 
|---|
 | 85 |   void addShortRangeResults(
 | 
|---|
 | 86 |       const KeySetsContainer &_keysets,
 | 
|---|
 | 87 |       const KeySetsContainer &_forcekeysets,
 | 
|---|
 | 88 |       const shortrangedata_t &_shortrangedata
 | 
|---|
 | 89 |       );
 | 
|---|
 | 90 | 
 | 
|---|
 | 91 |   /** Clears all internal containers.
 | 
|---|
 | 92 |    *
 | 
|---|
 | 93 |    * \note Also resets ResultsType.
 | 
|---|
 | 94 |    */
 | 
|---|
 | 95 |   void clear()
 | 
|---|
 | 96 |   {
 | 
|---|
 | 97 |     keysets.clear();
 | 
|---|
 | 98 |     forcekeysets.clear();
 | 
|---|
 | 99 |     shortrangedata.clear();
 | 
|---|
 | 100 | #ifdef HAVE_VMG
 | 
|---|
 | 101 |     longrangedata.clear();
 | 
|---|
 | 102 | #endif
 | 
|---|
 | 103 |     ResultsType = BothRanges;
 | 
|---|
 | 104 |   }
 | 
|---|
 | 105 | 
 | 
|---|
 | 106 |   const KeySetsContainer &getKeySets() const { return keysets; }
 | 
|---|
 | 107 |   const KeySetsContainer &getForceKeySets() const  { return forcekeysets; }
 | 
|---|
 | 108 |   const shortrangedata_t& getShortRangeResults() const  { return shortrangedata; }
 | 
|---|
 | 109 | #ifdef HAVE_VMG
 | 
|---|
 | 110 |   const longrangedata_t& getLongRangeResults() const;
 | 
|---|
 | 111 | #endif
 | 
|---|
 | 112 |   bool areFullRangeResultsPresent() const { return (ResultsType == BothRanges); }
 | 
|---|
 | 113 | 
 | 
|---|
 | 114 | private:
 | 
|---|
 | 115 |   //!> indicates whether we contain short range only or both results
 | 
|---|
 | 116 |   enum ResultsType_t {
 | 
|---|
 | 117 |     ShortRangeOnly,
 | 
|---|
 | 118 |     BothRanges,
 | 
|---|
 | 119 |   } ResultsType;
 | 
|---|
 | 120 | 
 | 
|---|
 | 121 |   //!> container for all KeySet's without hydrogens to the jobs
 | 
|---|
 | 122 |   KeySetsContainer keysets;
 | 
|---|
 | 123 |   //!> container for all KeySet's with all except saturation hydrogen to the jobs
 | 
|---|
 | 124 |   KeySetsContainer forcekeysets;
 | 
|---|
 | 125 |   //!> container for all short-range results
 | 
|---|
 | 126 |   std::map<JobId_t, MPQCData> shortrangedata;
 | 
|---|
 | 127 | 
 | 
|---|
 | 128 | #ifdef HAVE_VMG
 | 
|---|
 | 129 |   //!> container for all long-range results
 | 
|---|
 | 130 |   std::map<JobId_t, VMGData> longrangedata;
 | 
|---|
 | 131 | #endif
 | 
|---|
| [55e1bc] | 132 | 
 | 
|---|
 | 133 |   friend class boost::serialization::access;
 | 
|---|
 | 134 |   // serialization
 | 
|---|
 | 135 |   template <typename Archive>
 | 
|---|
 | 136 |   void serialize(Archive& ar, const unsigned int version)
 | 
|---|
 | 137 |   {
 | 
|---|
 | 138 |     ar & ResultsType;
 | 
|---|
 | 139 |     ar & keysets;
 | 
|---|
 | 140 |     ar & forcekeysets;
 | 
|---|
 | 141 |     ar & shortrangedata;
 | 
|---|
 | 142 | #ifdef HAVE_VMG
 | 
|---|
 | 143 |     ar & longrangedata;
 | 
|---|
 | 144 | #endif
 | 
|---|
 | 145 |   }
 | 
|---|
| [a3427f] | 146 | };
 | 
|---|
 | 147 | 
 | 
|---|
 | 148 | #endif /* FRAGMENTATIONRESULTCONTAINER_HPP_ */
 | 
|---|