| 1 | /*
 | 
|---|
| 2 |  * Project: MoleCuilder
 | 
|---|
| 3 |  * Description: creates and alters molecular systems
 | 
|---|
| 4 |  * Copyright (C)  2012 University of Bonn. All rights reserved.
 | 
|---|
| 5 |  * 
 | 
|---|
| 6 |  *
 | 
|---|
| 7 |  *   This file is part of MoleCuilder.
 | 
|---|
| 8 |  *
 | 
|---|
| 9 |  *    MoleCuilder is free software: you can redistribute it and/or modify
 | 
|---|
| 10 |  *    it under the terms of the GNU General Public License as published by
 | 
|---|
| 11 |  *    the Free Software Foundation, either version 2 of the License, or
 | 
|---|
| 12 |  *    (at your option) any later version.
 | 
|---|
| 13 |  *
 | 
|---|
| 14 |  *    MoleCuilder is distributed in the hope that it will be useful,
 | 
|---|
| 15 |  *    but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
|---|
| 16 |  *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
|---|
| 17 |  *    GNU General Public License for more details.
 | 
|---|
| 18 |  *
 | 
|---|
| 19 |  *    You should have received a copy of the GNU General Public License
 | 
|---|
| 20 |  *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>.
 | 
|---|
| 21 |  */
 | 
|---|
| 22 | 
 | 
|---|
| 23 | /*
 | 
|---|
| 24 |  * IndexedVectors.cpp
 | 
|---|
| 25 |  *
 | 
|---|
| 26 |  *  Created on: 29.07.2012
 | 
|---|
| 27 |  *      Author: heber
 | 
|---|
| 28 |  */
 | 
|---|
| 29 | 
 | 
|---|
| 30 | // include config.h
 | 
|---|
| 31 | #ifdef HAVE_CONFIG_H
 | 
|---|
| 32 | #include <config.h>
 | 
|---|
| 33 | #endif
 | 
|---|
| 34 | 
 | 
|---|
| 35 | #include "CodePatterns/MemDebug.hpp"
 | 
|---|
| 36 | 
 | 
|---|
| 37 | #include "Fragmentation/SetValues/IndexedVectors.hpp"
 | 
|---|
| 38 | 
 | 
|---|
| 39 | #include <iostream>
 | 
|---|
| 40 | 
 | 
|---|
| 41 | #include "CodePatterns/Assert.hpp"
 | 
|---|
| 42 | 
 | 
|---|
| 43 | // static member variables
 | 
|---|
| 44 | const size_t IndexedVectors::FixedSize = 3;
 | 
|---|
| 45 | const IndexedVectors::vector_t IndexedVectors::nullvector( FixedSize, 0.);
 | 
|---|
| 46 | 
 | 
|---|
| 47 | IndexedVectors::IndexedVectors(const indices_t &_indices, const vectors_t &_vectors)
 | 
|---|
| 48 | {
 | 
|---|
| 49 |   ASSERT(_indices.size() == _vectors.size(),
 | 
|---|
| 50 |       "IndexedVectors::IndexedVectors() - vector of indices and vectors don't match in size.");
 | 
|---|
| 51 |   indices_t::const_iterator indexiter = _indices.begin();
 | 
|---|
| 52 |   vectors_t::const_iterator vectoriter = _vectors.begin();
 | 
|---|
| 53 |   for (; vectoriter != _vectors.end(); ++indexiter, ++vectoriter) {
 | 
|---|
| 54 |     ASSERT( vectoriter->size() == FixedSize,
 | 
|---|
| 55 |         "IndexedVectors::IndexedVectors() - vector to instance "
 | 
|---|
| 56 |         +toString(*indexiter)+" has size "
 | 
|---|
| 57 |         +toString(vectoriter->size())+" different to FixedSize "
 | 
|---|
| 58 |         +toString(FixedSize)+".");
 | 
|---|
| 59 |     if (*indexiter != (size_t)DropIndex) { // skip all force vectors associated to -1
 | 
|---|
| 60 | #ifndef NDEBUG
 | 
|---|
| 61 |       std::pair<indexedvectors_t::iterator, bool> inserter =
 | 
|---|
| 62 | #endif
 | 
|---|
| 63 |       vectors.insert( std::make_pair( *indexiter, *vectoriter) );
 | 
|---|
| 64 |       ASSERT( inserter.second,
 | 
|---|
| 65 |           "IndexedVectors::IndexedVectors() - index "
 | 
|---|
| 66 |           +toString(inserter.first->first)+" already present with vector "
 | 
|---|
| 67 |           +toString(inserter.first->second)+".");
 | 
|---|
| 68 |     }
 | 
|---|
| 69 |   }
 | 
|---|
| 70 | }
 | 
|---|
| 71 | 
 | 
|---|
| 72 | IndexedVectors& IndexedVectors::operator=(const IndexedVectors &other)
 | 
|---|
| 73 | {
 | 
|---|
| 74 |   // check for self-assignment
 | 
|---|
| 75 |   if (this != &other) {
 | 
|---|
| 76 |     vectors.clear();
 | 
|---|
| 77 |     vectors = other.vectors;
 | 
|---|
| 78 |   }
 | 
|---|
| 79 |   return *this;
 | 
|---|
| 80 | }
 | 
|---|
| 81 | 
 | 
|---|
| 82 | void IndexedVectors::superposeOtherIndexedVectors(const IndexedVectors &other, const double prefactor)
 | 
|---|
| 83 | {
 | 
|---|
| 84 |   for (indexedvectors_t::const_iterator otheriter = other.vectors.begin();
 | 
|---|
| 85 |       otheriter != other.vectors.end(); ++otheriter) {
 | 
|---|
| 86 |     indexedvectors_t::iterator iter = vectors.find(otheriter->first);
 | 
|---|
| 87 |     if (iter == vectors.end()) {
 | 
|---|
| 88 |       // index does not exist
 | 
|---|
| 89 |       std::pair<indexedvectors_t::iterator, bool> inserter =
 | 
|---|
| 90 |           vectors.insert( std::make_pair( otheriter->first, nullvector) );
 | 
|---|
| 91 |       ASSERT( inserter.second,
 | 
|---|
| 92 |           "IndexedVectors::superposeOtherIndexedVectors() - index is present though unfound before?");
 | 
|---|
| 93 |       iter = inserter.first;
 | 
|---|
| 94 |     }
 | 
|---|
| 95 |     // now simply vector to index from other instance add with prefactor
 | 
|---|
| 96 |     vector_t::iterator vectoriter = iter->second.begin();
 | 
|---|
| 97 |     vector_t::const_iterator othervectoriter = otheriter->second.begin();
 | 
|---|
| 98 |     for (;vectoriter != iter->second.end(); ++vectoriter, ++othervectoriter) {
 | 
|---|
| 99 |       *vectoriter += prefactor * (*othervectoriter);
 | 
|---|
| 100 |     }
 | 
|---|
| 101 |   }
 | 
|---|
| 102 | }
 | 
|---|
| 103 | 
 | 
|---|
| 104 | std::ostream & operator<<(std::ostream &ost, const IndexedVectors &other)
 | 
|---|
| 105 | {
 | 
|---|
| 106 |   for (IndexedVectors::indexedvectors_t::const_iterator iter = other.vectors.begin();
 | 
|---|
| 107 |       iter != other.vectors.end(); ++iter)
 | 
|---|
| 108 |     ost << "(" << iter->first << "," << iter->second << ") ";
 | 
|---|
| 109 |   return ost;
 | 
|---|
| 110 | }
 | 
|---|
| 111 | 
 | 
|---|
| 112 | template<> IndexedVectors ZeroInstance<IndexedVectors>()
 | 
|---|
| 113 | {
 | 
|---|
| 114 |   IndexedVectors returnvalue;
 | 
|---|
| 115 |   return returnvalue;
 | 
|---|
| 116 | }
 | 
|---|