source: src/Fragmentation/Makefile.am@ d713ce

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since d713ce was d713ce, checked in by Frederik Heber <heber@…>, 9 years ago

AtomFragmentsMap is now a Singleton and part of Homology code.

  • Property mode set to 100644
File size: 6.1 KB
RevLine 
[a9b86d]1# PLEASE adhere to the alphabetical ordering in this Makefile!
2# Also indentation by a single tab
3
4FRAGMENTATIONSOURCE = \
[ca8bea]5 Fragmentation/Exporters/ExportGraph_ToFiles.cpp \
[786d28]6 Fragmentation/Exporters/ExportGraph_ToJobs.cpp \
[ca8bea]7 Fragmentation/Exporters/ExportGraph.cpp \
[c3df23]8 Fragmentation/Exporters/HydrogenPool.cpp \
[bac32f]9 Fragmentation/Exporters/SaturatedBond.cpp \
[7d5fcd]10 Fragmentation/Exporters/SaturatedFragment.cpp \
[a1d1dd]11 Fragmentation/Exporters/SaturationDistanceMaximizer.cpp \
[f54930]12 Fragmentation/Exporters/SphericalPointDistribution.cpp \
13 Fragmentation/Exporters/SphericalPointDistribution_getPoints.cpp \
[d713ce]14 Fragmentation/Homology/AtomFragmentsMap.cpp \
[8387e0]15 Fragmentation/Homology/FragmentEdge.cpp \
16 Fragmentation/Homology/FragmentNode.cpp \
[4694df]17 Fragmentation/Homology/HomologyContainer.cpp \
[7b6b21f]18 Fragmentation/Homology/HomologyGraph.cpp \
[730d7a]19 Fragmentation/AdaptivityMap.cpp \
[212c179]20 Fragmentation/BondsPerShortestPath.cpp \
[a9b86d]21 Fragmentation/EnergyMatrix.cpp \
22 Fragmentation/ForceMatrix.cpp \
[246e13]23 Fragmentation/Fragmentation.cpp \
[d9a032]24 Fragmentation/fragmentation_helpers.cpp \
[dadc74]25 Fragmentation/Graph.cpp \
[a9b86d]26 Fragmentation/helpers.cpp \
27 Fragmentation/HessianMatrix.cpp \
[0331ee]28 Fragmentation/Interfragmenter.cpp \
[f0674a]29 Fragmentation/KeySet.cpp \
[a03d25]30 Fragmentation/MatrixContainer.cpp \
[f67817f]31 Fragmentation/PowerSetGenerator.cpp \
[dcbb5d]32 Fragmentation/SortIndex.cpp \
[a03d25]33 Fragmentation/UniqueFragments.cpp
[a9b86d]34
35FRAGMENTATIONHEADER = \
[ca8bea]36 Fragmentation/Exporters/ExportGraph_ToFiles.hpp \
[786d28]37 Fragmentation/Exporters/ExportGraph_ToJobs.hpp \
[ca8bea]38 Fragmentation/Exporters/ExportGraph.hpp \
[c3df23]39 Fragmentation/Exporters/HydrogenPool.hpp \
[bac32f]40 Fragmentation/Exporters/SaturatedBond.hpp \
[7d5fcd]41 Fragmentation/Exporters/SaturatedFragment.hpp \
[a1d1dd]42 Fragmentation/Exporters/SaturationDistanceMaximizer.hpp \
[e895f7]43 Fragmentation/Exporters/SphericalPointDistribution.hpp \
[d713ce]44 Fragmentation/Homology/AtomFragmentsMap.hpp \
[8387e0]45 Fragmentation/Homology/FragmentEdge.hpp \
46 Fragmentation/Homology/FragmentNode.hpp \
[4694df]47 Fragmentation/Homology/HomologyContainer.hpp \
[7b6b21f]48 Fragmentation/Homology/HomologyGraph.hpp \
[730d7a]49 Fragmentation/AdaptivityMap.hpp \
[f96874]50 Fragmentation/AtomMask.hpp \
[212c179]51 Fragmentation/BondsPerShortestPath.hpp \
[a9b86d]52 Fragmentation/defs.hpp \
53 Fragmentation/EnergyMatrix.hpp \
54 Fragmentation/ForceMatrix.hpp \
[246e13]55 Fragmentation/Fragmentation.hpp \
[f67817f]56 Fragmentation/fragmentation_helpers.hpp \
[dadc74]57 Fragmentation/Graph.hpp \
58 Fragmentation/helpers.cpp \
[a9b86d]59 Fragmentation/helpers.hpp \
60 Fragmentation/HessianMatrix.hpp \
[262ecc]61 Fragmentation/HydrogenSaturation_enum.hpp \
[0331ee]62 Fragmentation/Interfragmenter.hpp \
[f0674a]63 Fragmentation/KeySet.hpp \
[a03d25]64 Fragmentation/MatrixContainer.hpp \
[f96874]65 Fragmentation/Mask.hpp \
66 Fragmentation/MoleculeMask.hpp \
[f67817f]67 Fragmentation/PowerSetGenerator.hpp \
[dcbb5d]68 Fragmentation/SortIndex.hpp \
[a03d25]69 Fragmentation/UniqueFragments.hpp
[a9b86d]70
[fbf143]71lib_LTLIBRARIES += \
72 libMolecuilderFragmentation_KeysetsContainer.la
[fe0355]73noinst_LTLIBRARIES += \
74 libMolecuilderFragmentation.la \
75 libMolecuilderFragmentation_getFromKeyset.la \
76 libMolecuilderFragmentation_getFromKeysetStub.la
[214240]77libMolecuilderFragmentation_la_includedir = $(includedir)/MoleCuilder/
78libMolecuilderFragmentation_KeysetsContainer_la_includedir = $(includedir)/MoleCuilder/
79libMolecuilderFragmentation_getFromKeyset_la_includedir = $(includedir)/MoleCuilder/
80libMolecuilderFragmentation_getFromKeysetStub_la_includedir = $(includedir)/MoleCuilder/
[ac9ca4]81libMolecuilderFragmentation_la_CPPFLAGS = $(AM_CPPFLAGS)
82libMolecuilderFragmentation_la_LDFLAGS = $(AM_LDFLAGS)
[fbf143]83libMolecuilderFragmentation_KeysetsContainer_la_LIBADD = \
84 $(CodePatterns_LIBS)
[ac9ca4]85libMolecuilderFragmentation_la_LIBADD =
86if CONDJOBMARKET
87libMolecuilderFragmentation_la_CPPFLAGS += ${JobMarket_CFLAGS}
88libMolecuilderFragmentation_la_LDFLAGS += $(JobMarket_LDFLAGS)
89libMolecuilderFragmentation_la_LIBADD += $(JobMarket_LIBS)
90endif
[a9b86d]91
92nobase_libMolecuilderFragmentation_la_include_HEADERS = ${FRAGMENTATIONHEADER}
[fbf143]93nobase_libMolecuilderFragmentation_KeysetsContainer_la_include_HEADERS = \
94 Fragmentation/KeySetsContainer.hpp \
95 Fragmentation/parseKeySetFile.hpp
[a9b86d]96
97## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
98## target. Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
99## will therefore be treated as if it were literally part of the target name,
100## and the variable name derived from that.
101## The file extension .cc is recognized by Automake, and makes it produce
102## rules which invoke the C++ compiler to produce a libtool object file (.lo)
103## from each source file. Note that it is not necessary to list header files
104## which are already listed elsewhere in a _HEADERS variable assignment.
105libMolecuilderFragmentation_la_SOURCES = ${FRAGMENTATIONSOURCE}
[fbf143]106libMolecuilderFragmentation_KeysetsContainer_la_SOURCES = \
107 Fragmentation/KeySetsContainer.cpp \
108 Fragmentation/parseKeySetFile.cpp
[fe0355]109libMolecuilderFragmentation_getFromKeyset_la_SOURCES = \
110 Fragmentation/Homology/HomologyGraph_getFromKeyset.cpp
111libMolecuilderFragmentation_getFromKeysetStub_la_SOURCES = \
112 Fragmentation/Homology/HomologyGraph_getFromKeysetStub.cpp
[a9b86d]113
114## Instruct libtool to include ABI version information in the generated shared
115## library file (.so). The library ABI version is defined in configure.ac, so
116## that all version information is kept in one place.
[fbf143]117libMolecuilderFragmentation_KeysetsContainer_la_LDFLAGS = -version-info $(MOLECUILDER_SO_VERSION)
[a9b86d]118
119## The generated configuration header is installed in its own subdirectory of
120## $(libdir). The reason for this is that the configuration information put
121## into this header file describes the target platform the installed library
122## has been built for. Thus the file must not be installed into a location
123## intended for architecture-independent files, as defined by the Filesystem
124## Hierarchy Standard (FHS).
125## The nodist_ prefix instructs Automake to not generate rules for including
126## the listed files in the distribution on 'make dist'. Files that are listed
127## in _HEADERS variables are normally included in the distribution, but the
128## configuration header file is generated at configure time and should not be
129## shipped with the source tarball.
[fbf143]130libMolecuilderFragmentation_KeysetsContainer_libincludedir = $(libdir)/MoleCuilder/include
131nodist_libMolecuilderFragmentation_KeysetsContainer_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h
Note: See TracBrowser for help on using the repository browser.