| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2010-2012 University of Bonn. All rights reserved. | 
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| 5 | * | 
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| 6 | * | 
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| 7 | *   This file is part of MoleCuilder. | 
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| 8 | * | 
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| 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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| 10 | *    it under the terms of the GNU General Public License as published by | 
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| 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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| 12 | *    (at your option) any later version. | 
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| 13 | * | 
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| 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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| 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 17 | *    GNU General Public License for more details. | 
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| 18 | * | 
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| 19 | *    You should have received a copy of the GNU General Public License | 
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| 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| 21 | */ | 
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| 22 |  | 
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| 23 | /* | 
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| 24 | * KeySet.cpp | 
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| 25 | * | 
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| 26 | *  Created on: Oct 20, 2011 | 
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| 27 | *      Author: heber | 
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| 28 | */ | 
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| 29 |  | 
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| 30 | #ifdef HAVE_CONFIG_H | 
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| 31 | #include <config.h> | 
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| 32 | #endif | 
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| 33 |  | 
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| 34 | #include "CodePatterns/MemDebug.hpp" | 
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| 35 |  | 
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| 36 | #include <sstream> | 
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| 37 |  | 
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| 38 | #include "CodePatterns/Log.hpp" | 
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| 39 |  | 
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| 40 | #include "KeySet.hpp" | 
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| 41 |  | 
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| 42 | /** Constructor of class KeySet. | 
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| 43 | * | 
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| 44 | * This class contains a set of indices for the atoms contained in a fragment. | 
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| 45 | * | 
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| 46 | */ | 
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| 47 | KeySet::KeySet() | 
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| 48 | {} | 
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| 49 |  | 
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| 50 | /** Destructor of class KeySet. | 
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| 51 | * | 
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| 52 | */ | 
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| 53 | KeySet::~KeySet() | 
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| 54 | {} | 
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| 55 |  | 
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| 56 |  | 
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| 57 | /** Comparator to allow for placing in a map. | 
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| 58 | * | 
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| 59 | * @param a instance to compare to | 
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| 60 | * @return true - this instance has less items or the first different item itself is less, | 
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| 61 | *         false - else | 
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| 62 | */ | 
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| 63 | bool KeySet::operator<(const KeySet &a) const | 
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| 64 | { | 
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| 65 | //LOG(0, "my check is used."); | 
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| 66 | if (size() < a.size()) { | 
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| 67 | return true; | 
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| 68 | } else { | 
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| 69 | if (size() > a.size()) { | 
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| 70 | return false; | 
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| 71 | } else { | 
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| 72 | KeySet::iterator IteratorA = begin(); | 
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| 73 | KeySet::iterator IteratorB = a.begin(); | 
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| 74 | while ((IteratorA != end()) && (IteratorB != a.end())) { | 
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| 75 | if ((*IteratorA) <  (*IteratorB)) | 
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| 76 | return true; | 
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| 77 | else if ((*IteratorA) > (*IteratorB)) { | 
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| 78 | return false; | 
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| 79 | } // else, go on to next index | 
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| 80 | IteratorA++; | 
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| 81 | IteratorB++; | 
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| 82 | } // end of while loop | 
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| 83 | }// end of check in case of equal sizes | 
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| 84 | } | 
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| 85 | return false; // if we reach this point, they are equal | 
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| 86 | } | 
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| 87 |  | 
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| 88 | /** Scans a single line for number and puts them into \a KeySet. | 
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| 89 | * \param *buffer buffer to scan | 
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| 90 | * \return true - at least one valid atom id parsed, false - CurrentSet is empty | 
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| 91 | */ | 
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| 92 | bool KeySet::ScanBufferIntoKeySet(char *buffer) | 
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| 93 | { | 
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| 94 | std::stringstream line; | 
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| 95 | int AtomNr; | 
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| 96 | int status = 0; | 
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| 97 |  | 
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| 98 | line.str(buffer); | 
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| 99 | while (!line.eof()) { | 
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| 100 | line >> AtomNr; | 
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| 101 | if (AtomNr >= 0) { | 
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| 102 | insert(AtomNr);  // insert at end, hence in same order as in file! | 
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| 103 | status++; | 
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| 104 | } // else it's "-1" or else and thus must not be added | 
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| 105 | } | 
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| 106 | std::stringstream output; | 
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| 107 | for(KeySet::iterator runner = begin(); runner != end(); runner++) | 
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| 108 | output << (runner == begin() ? "" : " " ) << (*runner); | 
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| 109 | LOG(2, "INFO: The scanned KeySet is " << output.str()); | 
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| 110 | return (status != 0); | 
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| 111 | } | 
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