| [e895f7] | 1 | /*
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 | 2 |  * SphericalPointDistribution.hpp
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 | 3 |  *
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 | 4 |  *  Created on: May 29, 2014
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 | 5 |  *      Author: heber
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 | 6 |  */
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 | 7 | 
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 | 8 | 
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 | 9 | #ifndef SPHERICALPOINTDISTRIBUTION_HPP_
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 | 10 | #define SPHERICALPOINTDISTRIBUTION_HPP_
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 | 11 | 
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 | 12 | // include config.h
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 | 13 | #ifdef HAVE_CONFIG_H
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 | 14 | #include <config.h>
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 | 15 | #endif
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 | 16 | 
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 | 17 | #include "CodePatterns/Assert.hpp"
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 | 18 | 
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 | 19 | #include <cmath>
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 | 20 | #include <list>
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 | 21 | 
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 | 22 | #include "LinearAlgebra/Vector.hpp"
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 | 23 | 
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 | 24 | /** contains getters for the VSEPR model for specific number of electrons.
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 | 25 |  *
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 | 26 |  * This struct contains specialized functions returning a list of Vectors
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 | 27 |  * (points in space) to match the VSEPR model for the given number of electrons.
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 | 28 |  *
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 | 29 |  * This is implemented via template specialization of the function get().
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 | 30 |  *
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 | 31 |  * These specializations are taken from the python script \b CreateVspeShapes.py
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 | 32 |  * by Christian Neuen, 07th May 2009.
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 | 33 |  */
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 | 34 | struct SphericalPointDistribution
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 | 35 | {
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 | 36 |   /** Cstor for SphericalPointDistribution, allows setting radius of sphere
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 | 37 |    *
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 | 38 |    * \param _BondLength desired radius of sphere
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 | 39 |    */
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 | 40 |   SphericalPointDistribution(const double _Bondlength = 1.) :
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| [81557e] | 41 |     Bondlength(_Bondlength)
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| [e895f7] | 42 |   {}
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 | 43 | 
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 | 44 |   //!> typedef for the list of points
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 | 45 |   typedef std::list<Vector> Polygon_t;
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 | 46 | 
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 | 47 |   /** General getter function for the distribution of points on the surface.
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 | 48 |    *
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 | 49 |    * \warn this function needs to be specialized!
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 | 50 |    *
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 | 51 |    * \return Polygon_t with points on the surface centered at (0,0,0)
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 | 52 |    */
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| [81557e] | 53 |   template <int N> Polygon_t get() const
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| [e895f7] | 54 |   {
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 | 55 |     ASSERT(0, "SphericalPointDistribution::get() - not specialized for "+toString(N)+".");
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 | 56 |   }
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 | 57 | 
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| [d468b5] | 58 |   /** Matches a given spherical distribution with another containing more
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 | 59 |    * points.
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 | 60 |    *
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 | 61 |    * This is a helper to determine points where to best insert saturation
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 | 62 |    * hydrogens.
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| [e895f7] | 63 |    *
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| [d468b5] | 64 |    * \param _polygon current occupied positions
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 | 65 |    * \param _newpolygon ideal distribution to match best with current occupied
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 | 66 |    *        positions
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 | 67 |    * \return remaining vacant positions relative to \a _polygon
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| [e895f7] | 68 |    */
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| [d468b5] | 69 |   static Polygon_t matchSphericalPointDistributions(
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 | 70 |       const Polygon_t &_polygon,
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 | 71 |       const Polygon_t &_newpolygon
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 | 72 |       );
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 | 73 | 
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| [e895f7] | 74 | 
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 | 75 |   //!> default radius of the spherical distribution
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 | 76 |   const double Bondlength;
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 | 77 |   //!> precalculated value for root of 3
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| [81557e] | 78 |   static const double SQRT_3;
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| [e895f7] | 79 | };
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 | 80 | 
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| [f54930] | 81 | // declare specializations
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 | 82 | 
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| [81557e] | 83 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<0>() const;
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 | 84 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<1>() const;
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 | 85 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<2>() const;
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 | 86 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<3>() const;
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 | 87 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<4>() const;
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 | 88 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<5>() const;
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 | 89 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<6>() const;
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 | 90 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<7>() const;
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 | 91 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<8>() const;
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 | 92 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<9>() const;
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 | 93 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<10>() const;
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 | 94 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<11>() const;
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 | 95 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<12>() const;
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 | 96 | template <> SphericalPointDistribution::Polygon_t SphericalPointDistribution::get<14>() const;
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| [e895f7] | 97 | 
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 | 98 | #endif /* SPHERICALPOINTDISTRIBUTION_HPP_ */
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