| [bcf653] | 1 | /*
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 | 2 |  * Project: MoleCuilder
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 | 3 |  * Description: creates and alters molecular systems
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| [0aa122] | 4 |  * Copyright (C)  2010-2012 University of Bonn. All rights reserved.
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| [94d5ac6] | 5 |  * 
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 | 6 |  *
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 | 7 |  *   This file is part of MoleCuilder.
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 | 8 |  *
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 | 9 |  *    MoleCuilder is free software: you can redistribute it and/or modify
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 | 10 |  *    it under the terms of the GNU General Public License as published by
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 | 11 |  *    the Free Software Foundation, either version 2 of the License, or
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 | 12 |  *    (at your option) any later version.
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 | 13 |  *
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 | 14 |  *    MoleCuilder is distributed in the hope that it will be useful,
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 | 15 |  *    but WITHOUT ANY WARRANTY; without even the implied warranty of
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 | 16 |  *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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 | 17 |  *    GNU General Public License for more details.
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 | 18 |  *
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 | 19 |  *    You should have received a copy of the GNU General Public License
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 | 20 |  *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>.
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| [bcf653] | 21 |  */
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 | 22 | 
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| [6b919f8] | 23 | /*
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 | 24 |  * atom_bondedparticleinfo.cpp
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 | 25 |  *
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 | 26 |  *  Created on: Oct 19, 2009
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 | 27 |  *      Author: heber
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 | 28 |  */
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 | 29 | 
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| [bf3817] | 30 | // include config.h
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 | 31 | #ifdef HAVE_CONFIG_H
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 | 32 | #include <config.h>
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 | 33 | #endif
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 | 34 | 
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| [ad011c] | 35 | #include "CodePatterns/MemDebug.hpp"
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| [112b09] | 36 | 
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| [9d83b6] | 37 | #include "CodePatterns/Assert.hpp"
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| [38c44b] | 38 | #include "CodePatterns/Log.hpp"
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| [9d83b6] | 39 | 
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 | 40 | #include "WorldTime.hpp"
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 | 41 | 
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| [6b919f8] | 42 | #include "atom_bondedparticleinfo.hpp"
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 | 43 | 
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| [5e2f80] | 44 | 
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 | 45 | BondList BondedParticleInfo::emptyList;
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 | 46 | 
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| [6b919f8] | 47 | /** Constructor of class BondedParticleInfo.
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 | 48 |  */
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| [97b825] | 49 | BondedParticleInfo::BondedParticleInfo() :
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 | 50 |   AdaptiveOrder(0),
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| [d760bb] | 51 |   MaxOrder(0)
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| [9d83b6] | 52 | {}
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| [6b919f8] | 53 | 
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 | 54 | /** Destructor of class BondedParticleInfo.
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 | 55 |  */
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 | 56 | BondedParticleInfo::~BondedParticleInfo()
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| [9d83b6] | 57 | {}
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 | 58 | 
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| [8cc22f] | 59 | void BondedParticleInfo::AppendTrajectoryStep(const unsigned int _step)
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| [1e6249] | 60 | {
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| [8cc22f] | 61 |   ListOfBonds.insert( std::make_pair(_step, emptyList) );
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| [38c44b] | 62 |   LOG(5,"BondedParticleInfo::AppendTrajectoryStep() called, size is " << ListOfBonds.size());
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| [1e6249] | 63 | }
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 | 64 | 
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| [8cc22f] | 65 | void BondedParticleInfo::removeTrajectoryStep(const unsigned int _step)
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| [7e51e1] | 66 | {
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| [8cc22f] | 67 |   ListOfBonds.erase(_step);
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| [7e51e1] | 68 |   LOG(5,"BondedParticleInfo::removeTrajectoryStep() called, size is " << ListOfBonds.size());
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 | 69 | }
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 | 70 | 
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| [9d83b6] | 71 | const BondList& BondedParticleInfo::getListOfBonds() const
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 | 72 | {
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| [8cc22f] | 73 |   return getListOfBondsAtStep(WorldTime::getTime());
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| [9d83b6] | 74 | }
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 | 75 | 
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 | 76 | const BondList& BondedParticleInfo::getListOfBondsAtStep(unsigned int _step) const
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| [6b919f8] | 77 | {
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| [8cc22f] | 78 |   BondTrajectory_t::const_iterator iter =
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 | 79 |     ListOfBonds.find(_step);
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 | 80 |   if (iter != ListOfBonds.end())
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 | 81 |     return iter->second;
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 | 82 |   return emptyList;
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| [9d83b6] | 83 | }
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