| [97ebf8] | 1 | /*
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 | 2 |  * LinearInterpolationofTrajectoriesAction.cpp
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 | 3 |  *
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 | 4 |  *  Created on: May 10, 2010
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 | 5 |  *      Author: heber
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 | 6 |  */
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 | 7 | 
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| [112b09] | 8 | #include "Helpers/MemDebug.hpp"
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 | 9 | 
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| [97ebf8] | 10 | #include "Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.hpp"
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| [1a3c26] | 11 | #include "Actions/ActionCalls.hpp"
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 | 12 | #include "atom.hpp"
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 | 13 | #include "defs.hpp"
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 | 14 | #include "log.hpp"
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 | 15 | #include "molecule.hpp"
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 | 16 | #include "verbose.hpp"
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 | 17 | #include "World.hpp"
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| [97ebf8] | 18 | 
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 | 19 | #include <iostream>
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 | 20 | #include <fstream>
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 | 21 | #include <string>
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 | 22 | 
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 | 23 | using namespace std;
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 | 24 | 
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 | 25 | #include "UIElements/UIFactory.hpp"
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 | 26 | #include "UIElements/Dialog.hpp"
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| [620fe5] | 27 | #include "UIElements/ValueStorage.hpp"
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| [97ebf8] | 28 | 
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 | 29 | 
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 | 30 | /****** MoleculeLinearInterpolationofTrajectoriesAction *****/
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 | 31 | 
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 | 32 | // memento to remember the state when undoing
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 | 33 | 
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 | 34 | //class MoleculeLinearInterpolationofTrajectoriesState : public ActionState {
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 | 35 | //public:
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 | 36 | //  MoleculeLinearInterpolationofTrajectoriesState(molecule* _mol,std::string _lastName) :
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 | 37 | //    mol(_mol),
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 | 38 | //    lastName(_lastName)
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 | 39 | //  {}
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 | 40 | //  molecule* mol;
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 | 41 | //  std::string lastName;
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 | 42 | //};
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 | 43 | 
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 | 44 | const char MoleculeLinearInterpolationofTrajectoriesAction::NAME[] = "linear-interpolate";
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 | 45 | 
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 | 46 | MoleculeLinearInterpolationofTrajectoriesAction::MoleculeLinearInterpolationofTrajectoriesAction() :
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 | 47 |   Action(NAME)
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 | 48 | {}
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 | 49 | 
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 | 50 | MoleculeLinearInterpolationofTrajectoriesAction::~MoleculeLinearInterpolationofTrajectoriesAction()
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 | 51 | {}
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 | 52 | 
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| [1a3c26] | 53 | void MoleculeLinearInterpolationofTrajectories(std::string &filename, int start, int end, bool IdMapping) {
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 | 54 |   ValueStorage::getInstance().setCurrentValue(MoleculeLinearInterpolationofTrajectoriesAction::NAME, filename);
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 | 55 |   ValueStorage::getInstance().setCurrentValue("start-step", start);
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 | 56 |   ValueStorage::getInstance().setCurrentValue("end-step", end);
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 | 57 |   ValueStorage::getInstance().setCurrentValue("id-mapping", IdMapping);
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 | 58 |   ActionRegistry::getInstance().getActionByName(MoleculeLinearInterpolationofTrajectoriesAction::NAME)->call(Action::NonInteractive);
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 | 59 | };
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 | 60 | 
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| [620fe5] | 61 | Dialog* MoleculeLinearInterpolationofTrajectoriesAction::createDialog() {
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 | 62 |   Dialog *dialog = UIFactory::getInstance().makeDialog();
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 | 63 | 
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 | 64 |   dialog->queryString(NAME, MapOfActions::getInstance().getDescription(NAME));
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 | 65 |   dialog->queryInt("start-step", MapOfActions::getInstance().getDescription("start-step"));
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 | 66 |   dialog->queryInt("end-step", MapOfActions::getInstance().getDescription("end-step"));
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 | 67 |   dialog->queryBoolean("id-mapping", MapOfActions::getInstance().getDescription("id-mapping"));
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 | 68 | 
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 | 69 |   return dialog;
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 | 70 | }
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 | 71 | 
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| [97ebf8] | 72 | Action::state_ptr MoleculeLinearInterpolationofTrajectoriesAction::performCall() {
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 | 73 |   string filename;
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 | 74 |   molecule *mol = NULL;
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 | 75 |   int start = -1;
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 | 76 |   int end = -1;
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 | 77 |   bool IdMapping = true;
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 | 78 | 
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| [620fe5] | 79 |   ValueStorage::getInstance().queryCurrentValue(NAME, filename);
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 | 80 |   ValueStorage::getInstance().queryCurrentValue("start-step", start);
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 | 81 |   ValueStorage::getInstance().queryCurrentValue("end-step", end);
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 | 82 |   ValueStorage::getInstance().queryCurrentValue("id-mapping", IdMapping);
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| [97ebf8] | 83 | 
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| [620fe5] | 84 |   for (World::MoleculeSelectionIterator iter = World::getInstance().beginMoleculeSelection(); iter != World::getInstance().endMoleculeSelection(); ++iter) {
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 | 85 |     mol = iter->second;
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| [97ebf8] | 86 |     DoLog(1) && (Log() << Verbose(1) << "Linear interpolation between configuration " << start << " and " << end << "." << endl);
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 | 87 |     if (IdMapping)
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 | 88 |       DoLog(1) && (Log() << Verbose(1) << "Using Identity for the permutation map." << endl);
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| [35b698] | 89 |     if (!mol->LinearInterpolationBetweenConfiguration(start, end, filename, *(World::getInstance().getConfig()), IdMapping))
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 | 90 |       DoLog(2) && (Log() << Verbose(2) << "Could not store " << filename << " files." << endl);
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| [97ebf8] | 91 |     else
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 | 92 |       DoLog(2) && (Log() << Verbose(2) << "Steps created and " << filename << " files stored." << endl);
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 | 93 |   }
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| [620fe5] | 94 |   return Action::success;
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| [97ebf8] | 95 | }
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 | 96 | 
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 | 97 | Action::state_ptr MoleculeLinearInterpolationofTrajectoriesAction::performUndo(Action::state_ptr _state) {
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 | 98 | //  MoleculeLinearInterpolationofTrajectoriesState *state = assert_cast<MoleculeLinearInterpolationofTrajectoriesState*>(_state.get());
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 | 99 | 
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 | 100 | //  string newName = state->mol->getName();
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 | 101 | //  state->mol->setName(state->lastName);
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 | 102 | 
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 | 103 |   return Action::failure;
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 | 104 | }
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 | 105 | 
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 | 106 | Action::state_ptr MoleculeLinearInterpolationofTrajectoriesAction::performRedo(Action::state_ptr _state){
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 | 107 |   // Undo and redo have to do the same for this action
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 | 108 |   return performUndo(_state);
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 | 109 | }
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 | 110 | 
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 | 111 | bool MoleculeLinearInterpolationofTrajectoriesAction::canUndo() {
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 | 112 |   return false;
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 | 113 | }
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 | 114 | 
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 | 115 | bool MoleculeLinearInterpolationofTrajectoriesAction::shouldUndo() {
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 | 116 |   return false;
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 | 117 | }
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 | 118 | 
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 | 119 | const string MoleculeLinearInterpolationofTrajectoriesAction::getName() {
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 | 120 |   return NAME;
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 | 121 | }
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