source: src/Actions/Makefile.am@ 0d4168

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since 0d4168 was 0d4168, checked in by Frederik Heber <heber@…>, 11 years ago

Allow setting of invalid values in Value class, Action::performCall() catches ParameterExceptions.

Value changes:

  • Values are now checked with get().
  • having the Actions fill their parameters on instantiation may lead to invalid values because actions that, e.g. add an atom and thereby make a so far invalid atomic id now valid, still have to get executed.
  • hence, we allow setting of invalid values. Validity is check/enforced on get(), i.e. when the Action is actually performed and not before. This is also the very moment where the parameters are first required to be valid.
  • Parameter::clone() and copy cstor must not use get() as invalid values are there still allowed.
  • TESTFIX: Value behavior changed.
  • TESTFIX: regression test add atom outside boundary is working again.
  • TESTFIX: regression tests load/store-session would be skipped as loading non-present file fails now. We use --help --actionname instead.

Action changes:

  • are turned into Action::failure.
  • ActionQueue calling an Action wrapped in try/catch-block for ActionFailure.
  • removed try/catch in doUI().
  • as exception (will) occur in ActionQueue's queue_thread, we need to catch it there. As the only thing we do is set the exit flag of the World. We can do this in ActionQueue as well.
  • Property mode set to 100644
File size: 29.0 KB
Line 
1# PLEASE adhere to the alphabetical ordering in this Makefile!
2# Also indentation by a single tab
3
4ACTIONSSOURCE = \
5 Actions/Action.cpp \
6 Actions/ActionHistory.cpp \
7 Actions/ActionQueue.cpp \
8 Actions/ActionRegistry.cpp \
9 Actions/ActionSequence.cpp \
10 Actions/ActionTrait.cpp \
11 Actions/ErrorAction.cpp \
12 Actions/MakroAction.cpp \
13 Actions/ManipulateAtomsProcess.cpp \
14 Actions/MethodAction.cpp \
15 Actions/OptionRegistry.cpp \
16 Actions/OptionTrait.cpp \
17 Actions/Process.cpp \
18 Actions/toCLIString.cpp \
19 Actions/toPythonString.cpp \
20 Actions/UndoRedoHelpers.cpp \
21 Actions/Values.cpp
22
23ACTIONSHEADER = \
24 Actions/Action.hpp \
25 Actions/ActionExceptions.hpp \
26 Actions/Action_impl_header.hpp \
27 Actions/Action_impl_pre.hpp \
28 Actions/Action_impl_undef.hpp \
29 Actions/ActionHistory.hpp \
30 Actions/ActionQueue.hpp \
31 Actions/ActionParameters.hpp \
32 Actions/ActionRegistry.hpp \
33 Actions/ActionSequence.hpp \
34 Actions/ActionState.hpp \
35 Actions/ActionTrait.hpp \
36 Actions/ActionTraits.hpp \
37 Actions/AtomsCalculation.hpp \
38 Actions/AtomsCalculation_impl.hpp \
39 Actions/Calculation.hpp \
40 Actions/Calculation_impl.hpp \
41 Actions/ErrorAction.hpp \
42 Actions/GlobalListOfActions.hpp \
43 Actions/MakroAction.hpp \
44 Actions/MakroAction_impl_header.hpp \
45 Actions/MakroAction_impl_pre.hpp \
46 Actions/ManipulateAtomsProcess.hpp \
47 Actions/MethodAction.hpp \
48 Actions/OptionRegistry.hpp \
49 Actions/OptionTrait.hpp \
50 Actions/Process.hpp \
51 Actions/Reaction.hpp \
52 Actions/Reaction_impl.hpp \
53 Actions/Reaction_impl_header.hpp \
54 Actions/Reaction_impl_pre.hpp \
55 Actions/toCLIString.hpp \
56 Actions/toPythonString.hpp \
57 Actions/UndoRedoHelpers.hpp \
58 Actions/Values.hpp
59
60ACTIONPROTOTYPESSOURCE = \
61 ${ANALYSISACTIONSOURCE} \
62 ${ATOMACTIONSOURCE} \
63 ${BONDACTIONSOURCE} \
64 ${CMDACTIONSOURCE} \
65 ${FILLACTIONSOURCE} \
66 ${FRAGMENTATIONACTIONSOURCE} \
67 ${GRAPHACTIONSOURCE} \
68 ${MOLECULEACTIONSOURCE} \
69 ${PARSERACTIONSOURCE} \
70 ${POTENTIALACTIONSOURCE} \
71 ${RANDONNUMBERSSOURCE} \
72 ${SELECTIONATOMACTIONSOURCE} \
73 ${SELECTIONMOLECULEACTIONSOURCE} \
74 ${SELECTIONSHAPEACTIONSOURCE} \
75 ${SHAPEACTIONSOURCE} \
76 ${TESSELATIONACTIONSOURCE} \
77 $(UNDOACTIONSOURCE) \
78 ${WORLDACTIONSOURCE}
79
80ACTIONPROTOTYPESHEADER = \
81 ${ANALYSISACTIONHEADER} \
82 ${ATOMACTIONHEADER} \
83 ${BONDACTIONHEADER} \
84 ${CMDACTIONHEADER} \
85 ${FILLACTIONHEADER} \
86 ${FRAGMENTATIONACTIONHEADER} \
87 ${GRAPHACTIONHEADER} \
88 ${MOLECULEACTIONHEADER} \
89 ${PARSERACTIONHEADER} \
90 ${POTENTIALACTIONHEADER} \
91 ${RANDONNUMBERSHEADER} \
92 ${SELECTIONATOMACTIONHEADER} \
93 ${SELECTIONMOLECULEACTIONHEADER} \
94 ${SELECTIONSHAPEACTIONHEADER} \
95 ${SHAPEACTIONHEADER} \
96 ${TESSELATIONACTIONHEADER} \
97 $(UNDOACTIONHEADER) \
98 ${WORLDACTIONHEADER}
99
100ACTIONPROTOTYPESDEFS = \
101 ${ANALYSISACTIONDEFS} \
102 ${ATOMACTIONDEFS} \
103 ${BONDACTIONDEFS} \
104 ${CMDACTIONDEFS} \
105 ${FILLACTIONDEFS} \
106 ${FRAGMENTATIONACTIONDEFS} \
107 ${GRAPHACTIONDEFS} \
108 ${MOLECULEACTIONDEFS} \
109 ${PARSERACTIONDEFS} \
110 ${POTENTIALACTIONDEFS} \
111 ${RANDONNUMBERSDEFS} \
112 ${SELECTIONATOMACTIONDEFS} \
113 ${SELECTIONMOLECULEACTIONDEFS} \
114 ${SELECTIONSHAPEACTIONDEFS} \
115 ${SHAPEACTIONDEFS} \
116 ${TESSELATIONACTIONDEFS} \
117 $(UNDOACTIONDEFS) \
118 ${WORLDACTIONDEFS}
119
120ANALYSISACTIONSOURCE = \
121 Actions/AnalysisAction/CalculateBoundingBoxAction.cpp \
122 Actions/AnalysisAction/CalculateCellVolumeAction.cpp \
123 Actions/AnalysisAction/CalculateMolarMassAction.cpp \
124 Actions/AnalysisAction/DipoleAngularCorrelationAction.cpp \
125 Actions/AnalysisAction/DipoleCorrelationAction.cpp \
126 Actions/AnalysisAction/MolecularVolumeAction.cpp \
127 Actions/AnalysisAction/PairCorrelationAction.cpp \
128 Actions/AnalysisAction/PointCorrelationAction.cpp \
129 Actions/AnalysisAction/PrincipalAxisSystemAction.cpp \
130 Actions/AnalysisAction/SurfaceCorrelationAction.cpp
131ANALYSISACTIONHEADER = \
132 Actions/AnalysisAction/CalculateBoundingBoxAction.hpp \
133 Actions/AnalysisAction/CalculateCellVolumeAction.hpp \
134 Actions/AnalysisAction/CalculateMolarMassAction.hpp \
135 Actions/AnalysisAction/DipoleAngularCorrelationAction.hpp \
136 Actions/AnalysisAction/DipoleCorrelationAction.hpp \
137 Actions/AnalysisAction/MolecularVolumeAction.hpp \
138 Actions/AnalysisAction/PairCorrelationAction.hpp \
139 Actions/AnalysisAction/PointCorrelationAction.hpp \
140 Actions/AnalysisAction/PrincipalAxisSystemAction.hpp \
141 Actions/AnalysisAction/SurfaceCorrelationAction.hpp
142ANALYSISACTIONDEFS = \
143 Actions/AnalysisAction/CalculateBoundingBoxAction.def \
144 Actions/AnalysisAction/CalculateCellVolumeAction.def \
145 Actions/AnalysisAction/CalculateMolarMassAction.def \
146 Actions/AnalysisAction/DipoleAngularCorrelationAction.def \
147 Actions/AnalysisAction/DipoleCorrelationAction.def \
148 Actions/AnalysisAction/MolecularVolumeAction.def \
149 Actions/AnalysisAction/PairCorrelationAction.def \
150 Actions/AnalysisAction/PointCorrelationAction.def \
151 Actions/AnalysisAction/PrincipalAxisSystemAction.def \
152 Actions/AnalysisAction/SurfaceCorrelationAction.def
153
154ATOMACTIONSOURCE = \
155 Actions/AtomAction/AddAction.cpp \
156 Actions/AtomAction/ChangeElementAction.cpp \
157 Actions/AtomAction/RemoveAction.cpp \
158 Actions/AtomAction/RotateAroundOriginByAngleAction.cpp \
159 Actions/AtomAction/SaveSelectedAtomsAction.cpp \
160 Actions/AtomAction/TranslateAction.cpp
161ATOMACTIONHEADER = \
162 Actions/AtomAction/AddAction.hpp \
163 Actions/AtomAction/ChangeElementAction.hpp \
164 Actions/AtomAction/RemoveAction.hpp \
165 Actions/AtomAction/RotateAroundOriginByAngleAction.hpp \
166 Actions/AtomAction/SaveSelectedAtomsAction.hpp \
167 Actions/AtomAction/TranslateAction.hpp
168ATOMACTIONDEFS = \
169 Actions/AtomAction/AddAction.def \
170 Actions/AtomAction/ChangeElementAction.def \
171 Actions/AtomAction/RemoveAction.def \
172 Actions/AtomAction/RotateAroundOriginByAngleAction.def \
173 Actions/AtomAction/SaveSelectedAtomsAction.def \
174 Actions/AtomAction/TranslateAction.def
175
176BONDACTIONSOURCE = \
177 Actions/BondAction/BondAddAction.cpp \
178 Actions/BondAction/BondRemoveAction.cpp
179BONDACTIONHEADER = \
180 Actions/BondAction/BondAddAction.hpp \
181 Actions/BondAction/BondRemoveAction.hpp
182BONDACTIONDEFS = \
183 Actions/BondAction/BondAddAction.def \
184 Actions/BondAction/BondRemoveAction.def
185
186CMDACTIONSOURCE = \
187 Actions/CommandAction/BondLengthTableAction.cpp \
188 Actions/CommandAction/ElementDbAction.cpp \
189 Actions/CommandAction/FastParsingAction.cpp \
190 Actions/CommandAction/HelpAction.cpp \
191 Actions/CommandAction/HelpRedistributeAction.cpp \
192 Actions/CommandAction/StoreSessionAction.cpp \
193 Actions/CommandAction/VerboseAction.cpp \
194 Actions/CommandAction/VersionAction.cpp \
195 Actions/CommandAction/WarrantyAction.cpp
196CMDACTIONHEADER = \
197 Actions/CommandAction/BondLengthTableAction.hpp \
198 Actions/CommandAction/ElementDbAction.hpp \
199 Actions/CommandAction/FastParsingAction.hpp \
200 Actions/CommandAction/HelpAction.hpp \
201 Actions/CommandAction/HelpRedistributeAction.hpp \
202 Actions/CommandAction/StoreSessionAction.hpp \
203 Actions/CommandAction/VerboseAction.hpp \
204 Actions/CommandAction/VersionAction.hpp \
205 Actions/CommandAction/WarrantyAction.hpp
206CMDACTIONDEFS = \
207 Actions/CommandAction/BondLengthTableAction.def \
208 Actions/CommandAction/ElementDbAction.def \
209 Actions/CommandAction/FastParsingAction.def \
210 Actions/CommandAction/HelpAction.def \
211 Actions/CommandAction/HelpRedistributeAction.def \
212 Actions/CommandAction/StoreSessionAction.def \
213 Actions/CommandAction/VerboseAction.def \
214 Actions/CommandAction/VersionAction.def \
215 Actions/CommandAction/WarrantyAction.def
216
217if CONDPYTHON
218CMDACTIONSOURCE += \
219 Actions/CommandAction/LoadSessionAction.cpp
220CMDACTIONHEADER += \
221 Actions/CommandAction/LoadSessionAction.hpp
222CMDACTIONDEFS += \
223 Actions/CommandAction/LoadSessionAction.def
224endif
225
226FILLACTIONSOURCE = \
227 Actions/FillAction/FillRegularGridAction.cpp \
228 Actions/FillAction/FillSurfaceAction.cpp
229FILLACTIONHEADER = \
230 Actions/FillAction/FillRegularGridAction.hpp \
231 Actions/FillAction/FillSurfaceAction.hpp
232FILLACTIONDEFS = \
233 Actions/FillAction/FillRegularGridAction.def \
234 Actions/FillAction/FillSurfaceAction.def
235
236
237FRAGMENTATIONACTIONSOURCE = \
238 Actions/FragmentationAction/AnalyseFragmentationResultsAction.cpp \
239 Actions/FragmentationAction/ClearFragmentationResultsAction.cpp \
240 Actions/FragmentationAction/FragmentationAction.cpp \
241 Actions/FragmentationAction/StoreSaturatedFragmentAction.cpp
242FRAGMENTATIONACTIONHEADER = \
243 Actions/FragmentationAction/AnalyseFragmentationResultsAction.hpp \
244 Actions/FragmentationAction/ClearFragmentationResultsAction.hpp \
245 Actions/FragmentationAction/FragmentationAction.hpp \
246 Actions/FragmentationAction/StoreSaturatedFragmentAction.hpp
247FRAGMENTATIONACTIONDEFS = \
248 Actions/FragmentationAction/AnalyseFragmentationResultsAction.def \
249 Actions/FragmentationAction/ClearFragmentationResultsAction.def \
250 Actions/FragmentationAction/FragmentationAction.def \
251 Actions/FragmentationAction/StoreSaturatedFragmentAction.def
252
253if CONDJOBMARKET
254FRAGMENTATIONACTIONSOURCE += \
255 Actions/FragmentationAction/FragmentationAutomationAction.cpp \
256 Actions/FragmentationAction/MolecularDynamicsAction.cpp \
257 Actions/FragmentationAction/ParseFragmentJobsAction.cpp
258FRAGMENTATIONACTIONHEADER += \
259 Actions/FragmentationAction/FragmentationAutomationAction.hpp \
260 Actions/FragmentationAction/MolecularDynamicsAction.hpp \
261 Actions/FragmentationAction/ParseFragmentJobsAction.hpp
262FRAGMENTATIONACTIONDEFS += \
263 Actions/FragmentationAction/FragmentationAutomationAction.def \
264 Actions/FragmentationAction/MolecularDynamicsAction.def \
265 Actions/FragmentationAction/ParseFragmentJobsAction.def
266endif
267
268GRAPHACTIONSOURCE = \
269 Actions/GraphAction/CreateAdjacencyAction.cpp \
270 Actions/GraphAction/DepthFirstSearchAction.cpp \
271 Actions/GraphAction/DestroyAdjacencyAction.cpp \
272 Actions/GraphAction/SubgraphDissectionAction.cpp \
273 Actions/GraphAction/UpdateMoleculesAction.cpp
274GRAPHACTIONHEADER = \
275 Actions/GraphAction/CreateAdjacencyAction.hpp \
276 Actions/GraphAction/DepthFirstSearchAction.hpp \
277 Actions/GraphAction/DestroyAdjacencyAction.hpp \
278 Actions/GraphAction/SubgraphDissectionAction.hpp \
279 Actions/GraphAction/UpdateMoleculesAction.hpp
280GRAPHACTIONDEFS = \
281 Actions/GraphAction/CreateAdjacencyAction.def \
282 Actions/GraphAction/DepthFirstSearchAction.def \
283 Actions/GraphAction/DestroyAdjacencyAction.def \
284 Actions/GraphAction/SubgraphDissectionAction.def \
285 Actions/GraphAction/UpdateMoleculesAction.def
286
287MOLECULEACTIONSOURCE = \
288 Actions/MoleculeAction/BondFileAction.cpp \
289 Actions/MoleculeAction/ChangeBondAngleAction.cpp \
290 Actions/MoleculeAction/ChangeNameAction.cpp \
291 Actions/MoleculeAction/CopyAction.cpp \
292 Actions/MoleculeAction/FillWithMoleculeAction.cpp \
293 Actions/MoleculeAction/FillVoidWithMoleculeAction.cpp \
294 Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.cpp \
295 Actions/MoleculeAction/LoadAction.cpp \
296 Actions/MoleculeAction/RotateAroundSelfByAngleAction.cpp \
297 Actions/MoleculeAction/RotateToPrincipalAxisSystemAction.cpp \
298 Actions/MoleculeAction/SaveSelectedMoleculesAction.cpp \
299 Actions/MoleculeAction/SaveAdjacencyAction.cpp \
300 Actions/MoleculeAction/SaveBondsAction.cpp \
301 Actions/MoleculeAction/SaveTemperatureAction.cpp \
302 Actions/MoleculeAction/StretchBondAction.cpp \
303 Actions/MoleculeAction/SuspendInWaterAction.cpp \
304 Actions/MoleculeAction/VerletIntegrationAction.cpp
305MOLECULEACTIONHEADER = \
306 Actions/MoleculeAction/BondFileAction.hpp \
307 Actions/MoleculeAction/ChangeBondAngleAction.hpp \
308 Actions/MoleculeAction/ChangeNameAction.hpp \
309 Actions/MoleculeAction/CopyAction.hpp \
310 Actions/MoleculeAction/FillWithMoleculeAction.hpp \
311 Actions/MoleculeAction/FillVoidWithMoleculeAction.hpp \
312 Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.hpp \
313 Actions/MoleculeAction/LoadAction.hpp \
314 Actions/MoleculeAction/RotateAroundSelfByAngleAction.hpp \
315 Actions/MoleculeAction/RotateToPrincipalAxisSystemAction.hpp \
316 Actions/MoleculeAction/SaveSelectedMoleculesAction.hpp \
317 Actions/MoleculeAction/SaveAdjacencyAction.hpp \
318 Actions/MoleculeAction/SaveBondsAction.hpp \
319 Actions/MoleculeAction/SaveTemperatureAction.hpp \
320 Actions/MoleculeAction/StretchBondAction.hpp \
321 Actions/MoleculeAction/SuspendInWaterAction.hpp \
322 Actions/MoleculeAction/VerletIntegrationAction.hpp
323MOLECULEACTIONDEFS = \
324 Actions/MoleculeAction/BondFileAction.def \
325 Actions/MoleculeAction/ChangeBondAngleAction.def \
326 Actions/MoleculeAction/ChangeNameAction.def \
327 Actions/MoleculeAction/CopyAction.def \
328 Actions/MoleculeAction/FillWithMoleculeAction.def \
329 Actions/MoleculeAction/FillVoidWithMoleculeAction.def \
330 Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.def \
331 Actions/MoleculeAction/LoadAction.def \
332 Actions/MoleculeAction/RotateAroundSelfByAngleAction.def \
333 Actions/MoleculeAction/RotateToPrincipalAxisSystemAction.def \
334 Actions/MoleculeAction/SaveSelectedMoleculesAction.def \
335 Actions/MoleculeAction/SaveAdjacencyAction.def \
336 Actions/MoleculeAction/SaveBondsAction.def \
337 Actions/MoleculeAction/SaveTemperatureAction.def \
338 Actions/MoleculeAction/StretchBondAction.def \
339 Actions/MoleculeAction/SuspendInWaterAction.def \
340 Actions/MoleculeAction/VerletIntegrationAction.def
341
342PARSERACTIONSOURCE = \
343 Actions/ParserAction/ParseTremoloPotentialsAction.cpp \
344 Actions/ParserAction/SaveSelectedAtomsAsExtTypesAction.cpp \
345 Actions/ParserAction/SetParserParametersAction.cpp \
346 Actions/ParserAction/SetOutputFormatsAction.cpp \
347 Actions/ParserAction/SetTremoloAtomdataAction.cpp
348PARSERACTIONHEADER = \
349 Actions/ParserAction/ParseTremoloPotentialsAction.hpp \
350 Actions/ParserAction/SaveSelectedAtomsAsExtTypesAction.hpp \
351 Actions/ParserAction/SetParserParametersAction.hpp \
352 Actions/ParserAction/SetOutputFormatsAction.hpp \
353 Actions/ParserAction/SetTremoloAtomdataAction.hpp
354PARSERACTIONDEFS = \
355 Actions/ParserAction/ParseTremoloPotentialsAction.def \
356 Actions/ParserAction/SaveSelectedAtomsAsExtTypesAction.def \
357 Actions/ParserAction/SetParserParametersAction.def \
358 Actions/ParserAction/SetOutputFormatsAction.def \
359 Actions/ParserAction/SetTremoloAtomdataAction.def
360
361POTENTIALACTIONSOURCE = \
362 Actions/PotentialAction/FitParticleChargesAction.cpp \
363 Actions/PotentialAction/ParseHomologiesAction.cpp \
364 Actions/PotentialAction/SaveHomologiesAction.cpp
365POTENTIALACTIONHEADER = \
366 Actions/PotentialAction/FitParticleChargesAction.hpp \
367 Actions/PotentialAction/ParseHomologiesAction.hpp \
368 Actions/PotentialAction/SaveHomologiesAction.hpp
369POTENTIALACTIONDEFS = \
370 Actions/PotentialAction/FitParticleChargesAction.def \
371 Actions/PotentialAction/ParseHomologiesAction.def \
372 Actions/PotentialAction/SaveHomologiesAction.def
373
374if CONDLEVMAR
375POTENTIALACTIONSOURCE += \
376 Actions/PotentialAction/FitPotentialAction.cpp
377POTENTIALACTIONHEADER += \
378 Actions/PotentialAction/FitPotentialAction.hpp
379POTENTIALACTIONDEFS += \
380 Actions/PotentialAction/FitPotentialAction.def
381endif
382
383RANDONNUMBERSSOURCE =\
384 Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.cpp \
385 Actions/RandomNumbersAction/SetRandomNumbersEngineAction.cpp
386RANDONNUMBERSHEADER =\
387 Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.hpp \
388 Actions/RandomNumbersAction/SetRandomNumbersEngineAction.hpp
389RANDONNUMBERSDEFS =\
390 Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.def \
391 Actions/RandomNumbersAction/SetRandomNumbersEngineAction.def
392
393SELECTIONATOMACTIONSOURCE = \
394 Actions/SelectionAction/Atoms/AllAtomsAction.cpp \
395 Actions/SelectionAction/Atoms/AllAtomsInsideVolumeAction.cpp \
396 Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.cpp \
397 Actions/SelectionAction/Atoms/AtomByElementAction.cpp \
398 Actions/SelectionAction/Atoms/AtomByIdAction.cpp \
399 Actions/SelectionAction/Atoms/AtomByOrderAction.cpp \
400 Actions/SelectionAction/Atoms/ClearAllAtomsAction.cpp \
401 Actions/SelectionAction/Atoms/InvertAtomsAction.cpp \
402 Actions/SelectionAction/Atoms/NotAllAtomsAction.cpp \
403 Actions/SelectionAction/Atoms/NotAllAtomsInsideVolumeAction.cpp \
404 Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.cpp \
405 Actions/SelectionAction/Atoms/NotAtomByElementAction.cpp \
406 Actions/SelectionAction/Atoms/NotAtomByIdAction.cpp \
407 Actions/SelectionAction/Atoms/NotAtomByOrderAction.cpp
408SELECTIONATOMACTIONHEADER = \
409 Actions/SelectionAction/Atoms/AllAtomsAction.hpp \
410 Actions/SelectionAction/Atoms/AllAtomsInsideVolumeAction.hpp \
411 Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.hpp \
412 Actions/SelectionAction/Atoms/AtomByElementAction.hpp \
413 Actions/SelectionAction/Atoms/AtomByIdAction.hpp \
414 Actions/SelectionAction/Atoms/AtomByOrderAction.hpp \
415 Actions/SelectionAction/Atoms/ClearAllAtomsAction.hpp \
416 Actions/SelectionAction/Atoms/InvertAtomsAction.hpp \
417 Actions/SelectionAction/Atoms/NotAllAtomsAction.hpp \
418 Actions/SelectionAction/Atoms/NotAllAtomsInsideVolumeAction.hpp \
419 Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.hpp \
420 Actions/SelectionAction/Atoms/NotAtomByElementAction.hpp \
421 Actions/SelectionAction/Atoms/NotAtomByIdAction.hpp \
422 Actions/SelectionAction/Atoms/NotAtomByOrderAction.hpp
423SELECTIONATOMACTIONDEFS = \
424 Actions/SelectionAction/Atoms/AllAtomsAction.def \
425 Actions/SelectionAction/Atoms/AllAtomsInsideVolumeAction.def \
426 Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.def \
427 Actions/SelectionAction/Atoms/AtomByElementAction.def \
428 Actions/SelectionAction/Atoms/AtomByIdAction.def \
429 Actions/SelectionAction/Atoms/AtomByOrderAction.def \
430 Actions/SelectionAction/Atoms/ClearAllAtomsAction.def \
431 Actions/SelectionAction/Atoms/InvertAtomsAction.def \
432 Actions/SelectionAction/Atoms/NotAllAtomsAction.def \
433 Actions/SelectionAction/Atoms/NotAllAtomsInsideVolumeAction.def \
434 Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.def \
435 Actions/SelectionAction/Atoms/NotAtomByElementAction.def \
436 Actions/SelectionAction/Atoms/NotAtomByIdAction.def \
437 Actions/SelectionAction/Atoms/NotAtomByOrderAction.def
438
439SELECTIONMOLECULEACTIONSOURCE = \
440 Actions/SelectionAction/Molecules/AllMoleculesAction.cpp \
441 Actions/SelectionAction/Molecules/ClearAllMoleculesAction.cpp \
442 Actions/SelectionAction/Molecules/InvertMoleculesAction.cpp \
443 Actions/SelectionAction/Molecules/MoleculeByFormulaAction.cpp \
444 Actions/SelectionAction/Molecules/MoleculeByIdAction.cpp \
445 Actions/SelectionAction/Molecules/MoleculeByNameAction.cpp \
446 Actions/SelectionAction/Molecules/MoleculeByOrderAction.cpp \
447 Actions/SelectionAction/Molecules/MoleculeOfAtomAction.cpp \
448 Actions/SelectionAction/Molecules/NotAllMoleculesAction.cpp \
449 Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.cpp \
450 Actions/SelectionAction/Molecules/NotMoleculeByIdAction.cpp \
451 Actions/SelectionAction/Molecules/NotMoleculeByNameAction.cpp \
452 Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.cpp \
453 Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.cpp
454SELECTIONMOLECULEACTIONHEADER = \
455 Actions/SelectionAction/Molecules/AllMoleculesAction.hpp \
456 Actions/SelectionAction/Molecules/ClearAllMoleculesAction.hpp \
457 Actions/SelectionAction/Molecules/InvertMoleculesAction.hpp \
458 Actions/SelectionAction/Molecules/MoleculeByFormulaAction.hpp \
459 Actions/SelectionAction/Molecules/MoleculeByIdAction.hpp \
460 Actions/SelectionAction/Molecules/MoleculeByNameAction.hpp \
461 Actions/SelectionAction/Molecules/MoleculeByOrderAction.hpp \
462 Actions/SelectionAction/Molecules/MoleculeOfAtomAction.hpp \
463 Actions/SelectionAction/Molecules/NotAllMoleculesAction.hpp \
464 Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.hpp \
465 Actions/SelectionAction/Molecules/NotMoleculeByIdAction.hpp \
466 Actions/SelectionAction/Molecules/NotMoleculeByNameAction.hpp \
467 Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.hpp \
468 Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.hpp
469SELECTIONMOLECULEACTIONDEFS = \
470 Actions/SelectionAction/Molecules/AllMoleculesAction.def \
471 Actions/SelectionAction/Molecules/ClearAllMoleculesAction.def \
472 Actions/SelectionAction/Molecules/InvertMoleculesAction.def \
473 Actions/SelectionAction/Molecules/MoleculeByFormulaAction.def \
474 Actions/SelectionAction/Molecules/MoleculeByIdAction.def \
475 Actions/SelectionAction/Molecules/MoleculeByNameAction.def \
476 Actions/SelectionAction/Molecules/MoleculeByOrderAction.def \
477 Actions/SelectionAction/Molecules/MoleculeOfAtomAction.def \
478 Actions/SelectionAction/Molecules/NotAllMoleculesAction.def \
479 Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.def \
480 Actions/SelectionAction/Molecules/NotMoleculeByIdAction.def \
481 Actions/SelectionAction/Molecules/NotMoleculeByNameAction.def \
482 Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.def \
483 Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.def
484
485SELECTIONSHAPEACTIONSOURCE = \
486 Actions/SelectionAction/Shapes/AllShapesAction.cpp \
487 Actions/SelectionAction/Shapes/ShapeByNameAction.cpp \
488 Actions/SelectionAction/Shapes/NotAllShapesAction.cpp \
489 Actions/SelectionAction/Shapes/NotShapeByNameAction.cpp
490SELECTIONSHAPEACTIONHEADER = \
491 Actions/SelectionAction/Shapes/AllShapesAction.hpp \
492 Actions/SelectionAction/Shapes/ShapeByNameAction.hpp \
493 Actions/SelectionAction/Shapes/NotAllShapesAction.hpp \
494 Actions/SelectionAction/Shapes/NotShapeByNameAction.hpp
495SELECTIONSHAPEACTIONDEFS = \
496 Actions/SelectionAction/Shapes/AllShapesAction.def \
497 Actions/SelectionAction/Shapes/ShapeByNameAction.def \
498 Actions/SelectionAction/Shapes/NotAllShapesAction.def \
499 Actions/SelectionAction/Shapes/NotShapeByNameAction.def
500
501SHAPEACTIONSOURCE = \
502 Actions/ShapeAction/CombineShapesAction.cpp \
503 Actions/ShapeAction/CreateShapeAction.cpp \
504 Actions/ShapeAction/RemoveShapeAction.cpp \
505 Actions/ShapeAction/RotateShapeAction.cpp \
506 Actions/ShapeAction/StretchShapeAction.cpp \
507 Actions/ShapeAction/TranslateShapeAction.cpp
508SHAPEACTIONHEADER = \
509 Actions/ShapeAction/CombineShapesAction.hpp \
510 Actions/ShapeAction/CreateShapeAction.hpp \
511 Actions/ShapeAction/RemoveShapeAction.hpp \
512 Actions/ShapeAction/RotateShapeAction.hpp \
513 Actions/ShapeAction/StretchShapeAction.hpp \
514 Actions/ShapeAction/TranslateShapeAction.hpp
515SHAPEACTIONDEFS = \
516 Actions/ShapeAction/CombineShapesAction.def \
517 Actions/ShapeAction/CreateShapeAction.def \
518 Actions/ShapeAction/RemoveShapeAction.def \
519 Actions/ShapeAction/RotateShapeAction.def \
520 Actions/ShapeAction/StretchShapeAction.def \
521 Actions/ShapeAction/TranslateShapeAction.def
522
523TESSELATIONACTIONSOURCE = \
524 Actions/TesselationAction/ConvexEnvelopeAction.cpp \
525 Actions/TesselationAction/NonConvexEnvelopeAction.cpp
526TESSELATIONACTIONHEADER = \
527 Actions/TesselationAction/ConvexEnvelopeAction.hpp \
528 Actions/TesselationAction/NonConvexEnvelopeAction.hpp
529TESSELATIONACTIONDEFS = \
530 Actions/TesselationAction/ConvexEnvelopeAction.def \
531 Actions/TesselationAction/NonConvexEnvelopeAction.def
532
533UNDOACTIONSOURCE = \
534 Actions/RedoAction.cpp \
535 Actions/UndoAction.cpp
536UNDOACTIONHEADER = \
537 Actions/RedoAction.hpp \
538 Actions/UndoAction.hpp
539UNDOACTIONDEFS = \
540 Actions/RedoAction.def \
541 Actions/UndoAction.def
542
543
544WORLDACTIONSOURCE = \
545 Actions/WorldAction/AddEmptyBoundaryAction.cpp \
546 Actions/WorldAction/BoundInBoxAction.cpp \
547 Actions/WorldAction/CenterInBoxAction.cpp \
548 Actions/WorldAction/CenterOnEdgeAction.cpp \
549 Actions/WorldAction/ChangeBoxAction.cpp \
550 Actions/WorldAction/InputAction.cpp \
551 Actions/WorldAction/OutputAction.cpp \
552 Actions/WorldAction/OutputAsAction.cpp \
553 Actions/WorldAction/RepeatBoxAction.cpp \
554 Actions/WorldAction/ScaleBoxAction.cpp \
555 Actions/WorldAction/SetBoundaryConditionsAction.cpp \
556 Actions/WorldAction/SetDefaultNameAction.cpp \
557 Actions/WorldAction/SetWorldTimeAction.cpp
558WORLDACTIONHEADER = \
559 Actions/WorldAction/AddEmptyBoundaryAction.hpp \
560 Actions/WorldAction/BoundInBoxAction.hpp \
561 Actions/WorldAction/CenterInBoxAction.hpp \
562 Actions/WorldAction/CenterOnEdgeAction.hpp \
563 Actions/WorldAction/ChangeBoxAction.hpp \
564 Actions/WorldAction/InputAction.hpp \
565 Actions/WorldAction/OutputAction.hpp \
566 Actions/WorldAction/OutputAsAction.hpp \
567 Actions/WorldAction/RepeatBoxAction.hpp \
568 Actions/WorldAction/ScaleBoxAction.hpp \
569 Actions/WorldAction/SetBoundaryConditionsAction.hpp \
570 Actions/WorldAction/SetDefaultNameAction.hpp \
571 Actions/WorldAction/SetWorldTimeAction.hpp
572WORLDACTIONDEFS = \
573 Actions/WorldAction/AddEmptyBoundaryAction.def \
574 Actions/WorldAction/BoundInBoxAction.def \
575 Actions/WorldAction/CenterInBoxAction.def \
576 Actions/WorldAction/CenterOnEdgeAction.def \
577 Actions/WorldAction/ChangeBoxAction.def \
578 Actions/WorldAction/InputAction.def \
579 Actions/WorldAction/OutputAction.def \
580 Actions/WorldAction/OutputAsAction.def \
581 Actions/WorldAction/RepeatBoxAction.def \
582 Actions/WorldAction/ScaleBoxAction.def \
583 Actions/WorldAction/SetBoundaryConditionsAction.def \
584 Actions/WorldAction/SetDefaultNameAction.def \
585 Actions/WorldAction/SetWorldTimeAction.def
586
587#ACTIONPYTHONSOURCE_WITHDIR = $(ACTIONPROTOTYPESSOURCE:Action.cpp=Action.python.cpp)
588#ACTIONPYTHONSOURCE = $(notdir $(ACTIONPYTHONSOURCE_WITHDIR))
589
590noinst_LTLIBRARIES += \
591 libMolecuilderActions.la \
592 libMolecuilderActionPrototypes.la
593# libMolecuilderActionPython.la
594libMolecuilderActionPrototypes_la_CPPFLAGS = $(AM_CPPFLAGS)
595if CONDJOBMARKET
596libMolecuilderActionPrototypes_la_CPPFLAGS += $(JobMarket_CFLAGS)
597endif
598if CONDLEVMAR
599libMolecuilderActionPrototypes_la_CPPFLAGS += $(LEVMAR_CPPFLAGS)
600endif
601libMolecuilderActions_la_includedir = $(includedir)/MoleCuilder/
602libMolecuilderActionPrototypes_la_includedir = $(includedir)/MoleCuilder/
603#libMolecuilderActionPython_la_includedir = $(includedir)/MoleCuilder/
604
605BUILT_SOURCES += AllActionHeaders.hpp
606if CONDPYTHON
607BUILT_SOURCES += AllActionPython.hpp
608endif
609#$(ACTIONPYTHONSOURCE)
610
611# UIElements/libMolecuilderUI.la
612nobase_libMolecuilderActions_la_include_HEADERS = ${ACTIONSHEADER}
613nobase_libMolecuilderActionPrototypes_la_include_HEADERS = ${ACTIONPROTOTYPESHEADER} ${ACTIONPROTOTYPESDEFS}
614nodist_libMolecuilderActionPrototypes_la_include_HEADERS = AllActionHeaders.hpp
615#nobase_libMolecuilderActionPython_la_include_HEADERS = ${ACTIONPROTOTYPESHEADER} ${ACTIONPROTOTYPESDEFS}
616#nodist_libMolecuilderActionPython_la_include_HEADERS = AllActionHeaders.hpp
617
618## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
619## target. Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
620## will therefore be treated as if it were literally part of the target name,
621## and the variable name derived from that.
622## The file extension .cc is recognized by Automake, and makes it produce
623## rules which invoke the C++ compiler to produce a libtool object file (.lo)
624## from each source file. Note that it is not necessary to list header files
625## which are already listed elsewhere in a _HEADERS variable assignment.
626libMolecuilderActions_la_SOURCES = ${ACTIONSSOURCE}
627libMolecuilderActionPrototypes_la_SOURCES = ${ACTIONPROTOTYPESSOURCE}
628#libMolecuilderActionPython_la_SOURCES = ${ACTIONPYTHONSOURCE}
629
630## Instruct libtool to include ABI version information in the generated shared
631## library file (.so). The library ABI version is defined in configure.ac, so
632## that all version information is kept in one place.
633#libMolecuilderActions_la_LDFLAGS = -version-info $(MOLECUILDER_SO_VERSION)
634
635## The generated configuration header is installed in its own subdirectory of
636## $(libdir). The reason for this is that the configuration information put
637## into this header file describes the target platform the installed library
638## has been built for. Thus the file must not be installed into a location
639## intended for architecture-independent files, as defined by the Filesystem
640## Hierarchy Standard (FHS).
641## The nodist_ prefix instructs Automake to not generate rules for including
642## the listed files in the distribution on 'make dist'. Files that are listed
643## in _HEADERS variables are normally included in the distribution, but the
644## configuration header file is generated at configure time and should not be
645## shipped with the source tarball.
646#libMolecuilderActions_libincludedir = $(libdir)/MoleCuilder/include
647#nodist_libMolecuilderActions_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h
648
649## Install the generated pkg-config file (.pc) into the expected location for
650## architecture-dependent package configuration information. Occasionally,
651## pkg-config files are also used for architecture-independent data packages,
652## in which case the correct install location would be $(datadir)/pkgconfig.
653#pkgconfigdir = $(libdir)/pkgconfig
654#pkgconfig_DATA = $(top_builddir)/MoleCuilder.pc
655
656#SUFFIXES = .pytho n.cpp
657#.python.cpp: $*.def
658# echo "#include \"$<\"" >$@; \
659# echo "#include \"Actions/Action_impl_python.hpp\"" >>$@; \
660# echo "#include \"Actions/Action_impl_undef.hpp\"" >>$@;
661
662AllActionHeaders.hpp: $(ACTIONPROTOTYPESHEADER) Actions/GlobalListOfActions.hpp
663 echo "#ifndef ALLACTIONHEADERS_HPP_" >$@; \
664 echo "#define ALLACTIONHEADERS_HPP_" >>$@; \
665 for file in $(ACTIONPROTOTYPESHEADER); do \
666 echo "#include \"$$file\"" >>$@; \
667 done; \
668 echo "#endif /* ALLACTIONHEADERS_HPP_ */" >>$@;
669
670MOSTLYCLEANFILES += \
671 AllActionHeaders.hpp
672
673if CONDPYTHON
674AllActionPython.hpp: $(ACTIONPROTOTYPESHEADER) Actions/GlobalListOfActions.hpp
675 echo "#ifndef ALLACTIONPYTHON_HPP_" >$@; \
676 echo "#define ALLACTIONPYTHON_HPP_" >>$@; \
677 for file in $(ACTIONPROTOTYPESHEADER); do \
678 echo "#include \"`echo $$file | sed -e 's/hpp/def/'`\"" >>$@; \
679 echo "#include \"Actions/Action_impl_python.hpp\"" >>$@; \
680 echo "#include \"Actions/Action_impl_undef.hpp\"" >>$@; \
681 done; \
682 echo "#endif /* ALLACTIONPYTHON_HPP_ */" >>$@;
683
684MOSTLYCLEANFILES += \
685 AllActionPython.hpp
686
687endif
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