| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2013 University of Bonn. All rights reserved. | 
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| 5 | * | 
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| 6 | * | 
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| 7 | *   This file is part of MoleCuilder. | 
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| 8 | * | 
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| 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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| 10 | *    it under the terms of the GNU General Public License as published by | 
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| 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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| 12 | *    (at your option) any later version. | 
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| 13 | * | 
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| 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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| 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 17 | *    GNU General Public License for more details. | 
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| 18 | * | 
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| 19 | *    You should have received a copy of the GNU General Public License | 
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| 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| 21 | */ | 
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| 22 |  | 
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| 23 | /* | 
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| 24 | * SubgraphDissectionAction.cpp | 
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| 25 | * | 
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| 26 | *  Created on: Mar 1, 2013 | 
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| 27 | *      Author: heber | 
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| 28 | */ | 
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| 29 |  | 
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| 30 | // include config.h | 
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| 31 | #ifdef HAVE_CONFIG_H | 
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| 32 | #include <config.h> | 
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| 33 | #endif | 
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| 34 |  | 
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| 35 | #include "CodePatterns/MemDebug.hpp" | 
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| 36 |  | 
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| 37 | #include "CodePatterns/Chronos.hpp" | 
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| 38 |  | 
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| 39 | #include "Actions/GraphAction/CreateAdjacencyAction.hpp" | 
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| 40 | #include "Actions/GraphAction/DestroyAdjacencyAction.hpp" | 
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| 41 | #include "Actions/GraphAction/UpdateMoleculesAction.hpp" | 
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| 42 | #include "Actions/GraphAction/SubgraphDissectionAction.hpp" | 
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| 43 | #include "Actions/ActionRegistry.hpp" | 
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| 44 |  | 
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| 45 | #include "Descriptors/AtomDescriptor.hpp" | 
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| 46 |  | 
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| 47 | #include "SubgraphDissectionAction.def" | 
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| 48 |  | 
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| 49 | // some derived names: if CATEGORY is not given, we don't prefix with it | 
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| 50 | #ifdef CATEGORY | 
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| 51 | #define ACTION BOOST_PP_CAT(CATEGORY, BOOST_PP_CAT(ACTIONNAME, Action)) | 
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| 52 | #define COMMAND BOOST_PP_CAT(CATEGORY, ACTIONNAME) | 
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| 53 | #define PARAMS BOOST_PP_CAT(CATEGORY, BOOST_PP_CAT(ACTIONNAME, Parameters)) | 
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| 54 | #else | 
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| 55 | #define ACTION BOOST_PP_CAT(ACTIONNAME, Action) | 
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| 56 | #define COMMAND ACTIONNAME | 
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| 57 | #define PARAMS BOOST_PP_CAT(ACTIONNAME, Parameters) | 
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| 58 | #endif | 
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| 59 | // check if no lists given | 
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| 60 | #ifndef paramtypes | 
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| 61 | #define MAXPARAMTYPES 0 | 
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| 62 | #else | 
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| 63 | #define MAXPARAMTYPES BOOST_PP_SEQ_SIZE(paramtypes) | 
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| 64 | #endif | 
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| 65 | #ifndef paramdefaults | 
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| 66 | #define MAXPARAMDEFAULTS 0 | 
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| 67 | #else | 
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| 68 | #define MAXPARAMDEFAULTS BOOST_PP_SEQ_SIZE(paramdefaults) | 
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| 69 | #endif | 
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| 70 |  | 
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| 71 | namespace MoleCuilder { | 
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| 72 |  | 
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| 73 | // static instances | 
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| 74 | ActionSequence GraphSubgraphDissectionAction::actions; | 
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| 75 | bool GraphSubgraphDissectionAction::isPrepared = false; | 
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| 76 |  | 
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| 77 | GraphSubgraphDissectionAction::GraphSubgraphDissectionAction() : | 
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| 78 | MakroAction(ActionTraits< GraphSubgraphDissectionAction >(), actions, false) | 
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| 79 | {} | 
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| 80 |  | 
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| 81 | GraphSubgraphDissectionAction::~GraphSubgraphDissectionAction() | 
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| 82 | {} | 
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| 83 |  | 
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| 84 | void GraphSubgraphDissectionAction::prepare(ActionRegistry &AR) | 
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| 85 | { | 
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| 86 | actions.addAction(AR.getActionByName(std::string("destroy-adjacency"))); | 
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| 87 | actions.addAction(AR.getActionByName(std::string("create-adjacency"))); | 
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| 88 | actions.addAction(AR.getActionByName(std::string("update-molecules"))); | 
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| 89 | isPrepared = true; | 
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| 90 | } | 
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| 91 |  | 
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| 92 | void GraphSubgraphDissectionAction::unprepare(ActionRegistry &AR) | 
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| 93 | { | 
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| 94 | // empty sequence | 
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| 95 | while (actions.removeLastAction() != NULL); | 
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| 96 | isPrepared = false; | 
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| 97 | } | 
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| 98 |  | 
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| 99 | void reselectAtoms(const std::vector<atom *> &selected_atoms) | 
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| 100 | { | 
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| 101 | World::getInstance().clearAtomSelection(); | 
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| 102 | for (std::vector<atom *>::const_iterator iter = selected_atoms.begin(); | 
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| 103 | iter != selected_atoms.end(); | 
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| 104 | ++iter) | 
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| 105 | World::getInstance().selectAtom(*iter); | 
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| 106 | } | 
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| 107 |  | 
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| 108 | Action::state_ptr GraphSubgraphDissectionAction::performCall(){ | 
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| 109 | // we need to "emulate" that all atoms have been selected without destroying | 
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| 110 | // current selection | 
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| 111 | Chronos::getInstance().startTiming(TOKEN); | 
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| 112 | const std::vector<atom *> selected_atoms = World::getInstance().getSelectedAtoms(); | 
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| 113 | World::getInstance().selectAllAtoms(AllAtoms()); | 
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| 114 | Action::state_ptr state(MakroAction::performCall()); | 
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| 115 | reselectAtoms(selected_atoms); | 
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| 116 | Chronos::getInstance().endTiming(TOKEN); | 
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| 117 |  | 
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| 118 | return state; | 
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| 119 | } | 
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| 120 |  | 
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| 121 | Action::state_ptr GraphSubgraphDissectionAction::performUndo(Action::state_ptr _state) { | 
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| 122 | // we need to "emulate" that all atoms have been selected without destroying | 
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| 123 | // current selection | 
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| 124 | const std::vector<atom *> selected_atoms = World::getInstance().getSelectedAtoms(); | 
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| 125 | World::getInstance().selectAllAtoms(AllAtoms()); | 
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| 126 | Action::state_ptr state(MakroAction::performUndo(_state)); | 
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| 127 | reselectAtoms(selected_atoms); | 
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| 128 |  | 
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| 129 | return state; | 
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| 130 | } | 
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| 131 |  | 
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| 132 | Action::state_ptr GraphSubgraphDissectionAction::performRedo(Action::state_ptr _state){ | 
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| 133 | // we need to "emulate" that all atoms have been selected without destroying | 
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| 134 | // current selection | 
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| 135 | const std::vector<atom *> selected_atoms = World::getInstance().getSelectedAtoms(); | 
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| 136 | World::getInstance().selectAllAtoms(AllAtoms()); | 
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| 137 | Action::state_ptr state(MakroAction::performRedo(_state)); | 
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| 138 | reselectAtoms(selected_atoms); | 
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| 139 |  | 
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| 140 | return state; | 
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| 141 | } | 
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| 142 |  | 
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| 143 | // =========== command for calling action directly =========== | 
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| 144 | void COMMAND( | 
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| 145 | #if defined paramtypes && defined paramreferences && BOOST_PP_NOT_EQUAL(MAXPARAMTYPES,0) | 
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| 146 | #define BOOST_PP_LOCAL_MACRO(n) type_list(~, n, paramtypes, paramreferences) | 
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| 147 | #define BOOST_PP_LOCAL_LIMITS  (0, MAXPARAMTYPES-1) | 
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| 148 | #include BOOST_PP_LOCAL_ITERATE() | 
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| 149 | #endif | 
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| 150 | ) | 
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| 151 | { | 
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| 152 | ACTION *ToCall = dynamic_cast<ACTION*>(ActionRegistry::getInstance().getActionByName( TOKEN )); //->clone(params); | 
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| 153 | //ACTION::PARAMS params; | 
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| 154 | #if defined paramreferences && BOOST_PP_NOT_EQUAL(MAXPARAMTYPES,0) | 
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| 155 | #define BOOST_PP_LOCAL_MACRO(n) value_print(~, n, paramreferences, ToCall->params.) | 
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| 156 | #define BOOST_PP_LOCAL_LIMITS  (0, MAXPARAMTYPES-1) | 
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| 157 | #include BOOST_PP_LOCAL_ITERATE() | 
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| 158 | #endif | 
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| 159 | ToCall->call(Action::NonInteractive); | 
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| 160 | }; | 
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| 161 |  | 
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| 162 | void BOOST_PP_CAT( COMMAND, _stringargs)( | 
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| 163 | #if defined paramtypes && defined paramreferences && BOOST_PP_NOT_EQUAL(MAXPARAMTYPES,0) | 
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| 164 | #define BOOST_PP_LOCAL_MACRO(n) type_list(~, n, BOOST_PP_SEQ_TRANSFORM( type2string, , paramtypes), paramreferences) | 
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| 165 | #define BOOST_PP_LOCAL_LIMITS  (0, MAXPARAMTYPES-1) | 
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| 166 | #include BOOST_PP_LOCAL_ITERATE() | 
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| 167 | #endif | 
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| 168 | ) { | 
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| 169 | ACTION *ToCall = dynamic_cast<ACTION*>(ActionRegistry::getInstance().getActionByName( TOKEN )); //->clone(params); | 
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| 170 | //ACTION::PARAMS params; | 
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| 171 | #if defined paramtypes && defined paramtypes && BOOST_PP_NOT_EQUAL(MAXPARAMTYPES,0) | 
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| 172 | #define BOOST_PP_LOCAL_MACRO(n) valuetype_print(~, n, paramreferences, paramtypes, ToCall->params. ) | 
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| 173 | #define BOOST_PP_LOCAL_LIMITS  (0, MAXPARAMTYPES-1) | 
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| 174 | #include BOOST_PP_LOCAL_ITERATE() | 
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| 175 | #endif | 
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| 176 | ToCall->call(MoleCuilder::Action::NonInteractive); | 
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| 177 | }; | 
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| 178 |  | 
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| 179 | } | 
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