| [b54ac8] | 1 | /* | 
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|  | 2 | * AtomsCalculation_impl.hpp | 
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|  | 3 | * | 
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|  | 4 | *  Created on: Feb 19, 2010 | 
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|  | 5 | *      Author: crueger | 
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|  | 6 | */ | 
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|  | 7 |  | 
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|  | 8 | #ifndef ATOMSCALCULATION_IMPL_HPP_ | 
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|  | 9 | #define ATOMSCALCULATION_IMPL_HPP_ | 
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|  | 10 |  | 
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| [56f73b] | 11 | // include config.h | 
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|  | 12 | #ifdef HAVE_CONFIG_H | 
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|  | 13 | #include <config.h> | 
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|  | 14 | #endif | 
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|  | 15 |  | 
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|  | 16 |  | 
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| [b54ac8] | 17 | #include "Actions/AtomsCalculation.hpp" | 
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|  | 18 | #include "Actions/Calculation_impl.hpp" | 
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|  | 19 |  | 
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| [ce7fdc] | 20 | using namespace MoleCuilder; | 
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| [b54ac8] | 21 |  | 
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|  | 22 | template<typename T> | 
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| [3139b2] | 23 | AtomsCalculation<T>::AtomsCalculation(boost::function<T(atom*)> _op,const ActionTrait &_trait,AtomDescriptor _descr) : | 
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| [126867] | 24 | Calculation<std::vector<T> >(0,_trait), | 
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| [ead4e6] | 25 | descr(_descr), | 
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|  | 26 | op(_op) | 
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| [b54ac8] | 27 | {} | 
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|  | 28 |  | 
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|  | 29 | template<typename T> | 
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|  | 30 | AtomsCalculation<T>::~AtomsCalculation(){ | 
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|  | 31 | } | 
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|  | 32 |  | 
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|  | 33 | template<typename T> | 
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|  | 34 | std::vector<T>* AtomsCalculation<T>::doCalc(){ | 
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| [23b547] | 35 | World* world = World::getPointer(); | 
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| [b54ac8] | 36 | int steps = world->numAtoms(); | 
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|  | 37 | std::vector<T> *res = new std::vector<T>(); | 
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|  | 38 | res->reserve(steps); | 
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|  | 39 | Process::setMaxSteps(steps); | 
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|  | 40 | Process::start(); | 
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| [fa0b18] | 41 | for(World::internal_AtomIterator | 
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|  | 42 | iter=world->getAtomIter_internal(descr); | 
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|  | 43 | iter!=world->atomEnd_internal(); | 
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|  | 44 | ++iter){ | 
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|  | 45 |  | 
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| [b54ac8] | 46 | Process::setCurrStep(iter.getCount()); | 
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|  | 47 | res->push_back(op(*iter)); | 
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|  | 48 | } | 
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|  | 49 | Process::stop(); | 
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|  | 50 | return res; | 
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|  | 51 | } | 
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|  | 52 |  | 
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| [af5384] | 53 | template<typename T> | 
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|  | 54 | Action* AtomsCalculation<T>::clone(enum Action::QueryOptions flag) const | 
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|  | 55 | { | 
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|  | 56 | if (flag == Action::Interactive) | 
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|  | 57 | return new AtomsCalculation<T>(op, Action::Traits, descr); | 
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|  | 58 | else | 
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|  | 59 | return new AtomsCalculation<T>(*this); | 
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|  | 60 | } | 
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|  | 61 |  | 
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| [047878] | 62 | template<typename T> | 
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|  | 63 | Dialog *AtomsCalculation<T>::fillDialog(Dialog *dialog){ | 
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|  | 64 | ASSERT(dialog,"No Dialog given when filling action dialog"); | 
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|  | 65 | return dialog; | 
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|  | 66 | } | 
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| [b54ac8] | 67 |  | 
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|  | 68 | #endif /* ATOMSCALCULATION_IMPL_HPP_ */ | 
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